RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 KLHL41O60662 606 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 DIAPH2O60879 1101 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 HLA-DQB2P05538 268 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 PIRTP0C851 137 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 EDN3P14138 238 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 COX6B1P14854 86 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 TCF4P15884 667 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 TCP1P17987 556 aaKnown RBP8.32□□□□□ -1.08
SDF2-204ENST00000587338 CDH3P22223 829 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 CES1P23141 567 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 PTGER4P35408 488 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 CD86P42081 329 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 SLC1A1P43005 524 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 KPNA2P52292 529 aaKnown RBP8.32□□□□□ -1.08
SDF2-204ENST00000587338 XRCC4Q13426 336 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 GALNT3Q14435 633 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 PIGHQ14442 188 aaPredicted RBP8.32□□□□□ -1.08
SDF2-204ENST00000587338 HIF1AQ16665 826 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 PDPK2PQ6A1A2 396 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 TIGD7Q6NT04 549 aaPredicted RBP8.32□□□□□ -1.08
SDF2-204ENST00000587338 DUS1LQ6P1R4 473 aaKnown RBP8.32□□□□□ -1.08
SDF2-204ENST00000587338 SPOCD1Q6ZMY3 1216 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 C11orf96Q7Z7L8 435 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 NXPE1Q8N323 547 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 MNS1Q8NEH6 495 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 OR1L3Q8NH93 324 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 EID2BQ96D98 161 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 CNDP1Q96KN2 507 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 IP6K3Q96PC2 410 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 OSBPL9Q96SU4 736 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 WDR77Q9BQA1 342 aaPredicted RBP8.32□□□□□ -1.08
SDF2-204ENST00000587338 ADGRE3Q9BY15 652 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 ZFYVE1Q9HBF4 777 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 PCDH18Q9HCL0 1135 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 LCMT1Q9UIC8 334 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 SNX12Q9UMY4 172 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 BTRCQ9Y297 605 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.32□□□□□ -1.08
SDF2-204ENST00000587338 CFAP20Q9Y6A4 193 aaKnown RBP8.32□□□□□ -1.08
SDF2-204ENST00000587338 FBN3Q75N90 2809 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 MYO7BQ6PIF6 2116 aa8.32□□□□□ -1.08
SDF2-204ENST00000587338 A0A1B0GUH1 482 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 SLC9B1P1A6NJY1 282 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 MIF4GDA9UHW6 222 aaKnown RBP8.31□□□□□ -1.08
SDF2-204ENST00000587338 ANKRD66B4E2M5 251 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 MATN3O15232 486 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 CEP104O60308 925 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 IGHEP01854 428 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 STSP08842 583 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 MTHFD1P11586 935 aaKnown RBP8.31□□□□□ -1.08
SDF2-204ENST00000587338 AGXTP21549 392 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 PBLDP30039 288 aaPredicted RBP8.31□□□□□ -1.08
SDF2-204ENST00000587338 PCK1P35558 622 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 FOLR3P41439 243 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 PAFAH1B1P43034 410 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 PREPP48147 710 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 ADCY2Q08462 1091 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 GALNT2Q10471 571 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 CDC16Q13042 620 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 ART3Q13508 389 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 KRT81Q14533 505 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 HADHQ16836 314 aaKnown RBP8.31□□□□□ -1.08
SDF2-204ENST00000587338 BOLA3Q53S33 107 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 MLIPQ5VWP3 458 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 FAM83HQ6ZRV2 1179 aaPredicted RBP8.31□□□□□ -1.08
SDF2-204ENST00000587338 AMZ2Q86W34 360 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 LRRC49Q8IUZ0 686 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 CCDC50Q8IVM0 306 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 PARP9Q8IXQ6 854 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 CARFQ8N187 725 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 FAR1Q8WVX9 515 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 MAML1Q92585 1016 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 MS4A14Q96JA4 679 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 TTC25Q96NG3 672 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 GBP5Q96PP8 586 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 DHRS4Q9BTZ2 278 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 GPR63Q9BZJ6 419 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 RAD18Q9NS91 495 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 P4HTMQ9NXG6 502 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 NFKBIL1Q9UBC1 381 aaPredicted RBP8.31□□□□□ -1.08
SDF2-204ENST00000587338 CDC23Q9UJX2 597 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 PTRH2Q9Y3E5 179 aaKnown RBP8.31□□□□□ -1.08
SDF2-204ENST00000587338 ZNF711Q9Y462 761 aa8.31□□□□□ -1.08
SDF2-204ENST00000587338 KLF2Q9Y5W3 355 aaPredicted RBP8.31□□□□□ -1.08
SDF2-204ENST00000587338 CCDC66A2RUB6 948 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 GSAPA4D1B5 854 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 E7EQ34 232 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 ZNF749O43361 778 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 KLF7O75840 302 aaPredicted RBP8.3□□□□□ -1.08
SDF2-204ENST00000587338 KRT1P04264 644 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 MMP2P08253 660 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 RARAP10276 462 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 BPIP17213 487 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 POLR2CP19387 275 aaPredicted RBP8.3□□□□□ -1.08
SDF2-204ENST00000587338 HLA-DPA1P20036 260 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 CTNNA2P26232 953 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 HADHAP40939 763 aa8.3□□□□□ -1.08
SDF2-204ENST00000587338 TSFMP43897 325 aaKnown RBP8.3□□□□□ -1.08
SDF2-204ENST00000587338 MARCKSL1P49006 195 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms