RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 H2AFYO75367 372 aaKnown RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 KIAA0754O94854 1291 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 IGSF6O95976 241 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 FUCA1P04066 466 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 NEFHP12036 1026 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 GM2AP17900 193 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 XPAP23025 273 aaPredicted RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 NFKBIAP25963 317 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 AK4P27144 223 aaPredicted RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 ALDH4A1P30038 563 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 RPA3P35244 121 aaPredicted RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 CSNK1DP48730 415 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 PRAMEP78395 509 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 CRADDP78560 199 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 DSC2Q02487 901 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 SEPT6Q14141 434 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 ITIH4Q14624 930 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 POU6F1Q14863 301 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 PCSK7Q16549 785 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 CCDC153Q494R4 210 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 TMEM52BQ4KMG9 183 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 CERCAMQ5T4B2 595 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 TEDDM1Q5T9Z0 273 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 ATG16L1Q676U5 607 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 TTC19Q6DKK2 380 aaPredicted RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 DENND5AQ6IQ26 1287 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 LVRNQ6Q4G3 990 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 YTHDF3Q7Z739 585 aaKnown RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 STRA8Q7Z7C7 330 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 ZNF761Q86XN6 746 aaPredicted RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 GKN2Q86XP6 184 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 DTX1Q86Y01 620 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 NDUFAF2Q8N183 169 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 FSTL5Q8N475 847 aaPredicted RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 GBP7Q8N8V2 638 aaPredicted RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 CCDC197Q8NCU1 140 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 WDR48Q8TAF3 677 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 ARRDC2Q8TBH0 407 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 MGARPQ8TDB4 240 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 BRSK1Q8TDC3 778 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 TCP10LQ8TDR4 215 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 DENND1AQ8TEH3 1009 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 STYXQ8WUJ0 223 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 TSPAN17Q96FV3 270 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 TBATAQ96M53 351 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 WDR92Q96MX6 357 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 TMEM74Q96NL1 305 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 OSBPL1AQ9BXW6 950 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 DPEP2Q9H4A9 486 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 PLAC1Q9HBJ0 212 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 CYP4F12Q9HCS2 524 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 ZNF71Q9NQZ8 489 aaPredicted RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 CHRAC1Q9NRG0 131 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 TREX1Q9NSU2 369 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 SPATS2LQ9NUQ6 558 aaKnown RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 UBP1Q9NZI7 540 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 ACSL6Q9UKU0 697 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 PLEKHM1Q9Y4G2 1056 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 ST14Q9Y5Y6 855 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 UTP20O75691 2785 aaKnown RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 NBASA2RRP1 2371 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 SDK2Q58EX2 2172 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 A0A1W2PPM1 405 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 MROH6A6NGR9 719 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 C2orf81A6NN90 581 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 CXorf49A8MYA2 514 aaPredicted RBP7.7□□□□□ -1.18
VMP1-204ENST00000587259 TCP11X1B4DZS4 312 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 DUX1O43812 170 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 SOCS5O75159 536 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 SPAG7O75391 227 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 RECQL5O94762 991 aaPredicted RBP7.7□□□□□ -1.18
VMP1-204ENST00000587259 SNUPNO95149 360 aaKnown RBP7.7□□□□□ -1.18
VMP1-204ENST00000587259 TNFP01375 233 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 ITGB2P05107 769 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 MMP2P08253 660 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 DHRS4L1P0CG22 281 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 TROVE2P10155 538 aaKnown RBP eCLIP7.7□□□□□ -1.18
VMP1-204ENST00000587259 ERVK-10P10266 1014 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 PRKAR1AP10644 381 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 FGF3P11487 239 aaPredicted RBP7.7□□□□□ -1.18
VMP1-204ENST00000587259 COL6A2P12110 1019 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 LIFP15018 202 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 GLB1P16278 677 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 CR2P20023 1033 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 OGNP20774 298 aaKnown RBP7.7□□□□□ -1.18
VMP1-204ENST00000587259 HTR1BP28222 390 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 TYK2P29597 1187 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 ALDH3A1P30838 453 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 MMP12P39900 470 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 CD151P48509 253 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 BLKP51451 505 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 PRKAA2P54646 552 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 SLC12A2P55011 1212 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 MAXP61244 160 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 B4GALNT1Q00973 533 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 RALGDSQ12967 914 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 ARHGEF7Q14155 803 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 TSNAXIP1Q2TAA8 658 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 C14orf28Q4W4Y0 310 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 HSP90AA5PQ58FG0 334 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms