RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	UNC5D	Q6UXZ4	953 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	NAPRT	Q6XQN6	538 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	TMEM26	Q6ZUK4	368 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	VRK3	Q8IV63	474 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	GSPT2	Q8IYD1	628 aa	Known RBP	12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	TBC1D21	Q8IYX1	336 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	CNPY4	Q8N129	248 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	CACTIN-AS1	Q8N1I8	211 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	GPATCH11	Q8N954	259 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	SIDT2	Q8NBJ9	832 aa	Known RBP	12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	GIMAP7	Q8NHV1	300 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	CD200R1	Q8TD46	325 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	NDN	Q99608	321 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	SLC38A3	Q99624	504 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	GPR22	Q99680	433 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	PARD6B	Q9BYG5	372 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	POPDC3	Q9HBV1	291 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	IMP3	Q9NV31	184 aa	Known RBP	12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	TRMT6	Q9UJA5	497 aa	Known RBP	12.03	□□□□□ -0.48
PKN1-208	ENST00000586900		V9GYY5	206 aa	Predicted RBP	12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	UNC13C	Q8NB66	2214 aa		12.03	□□□□□ -0.48
PKN1-208	ENST00000586900	NTN3	O00634	580 aa	Predicted RBP	12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	B4GAT1	O43505	415 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	OPA1	O60313	960 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	TCEA3	O75764	348 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	MATN4	O95460	622 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	RPN2	P04844	631 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	MPC1L	P0DKB6	136 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	ABCG1	P45844	678 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	RGS4	P49798	205 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	CDKN2D	P55273	166 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	KRT33B	Q14525	404 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	SLC29A2	Q14542	456 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	ACSBG2	Q5FVE4	666 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	UBAP2	Q5T6F2	1119 aa	Known RBP	12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	SPRED1	Q7Z699	444 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	OR5K2	Q8NHB8	316 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	AEN	Q8WTP8	325 aa	Known RBP	12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	SLC44A1	Q8WWI5	657 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	ADAMTS14	Q8WXS8	1223 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	ELMO2	Q96JJ3	720 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	FOPNL	Q96NB1	174 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	FERD3L	Q96RJ6	166 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	SLC30A3	Q99726	388 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	DPYSL5	Q9BPU6	564 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	EPB41L4B	Q9H329	900 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	LRRN3	Q9H3W5	708 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	KIR3DX1	Q9H7L2	352 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	KCNK4	Q9NYG8	393 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	FETUB	Q9UGM5	382 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	POLG2	Q9UHN1	485 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	ASF1A	Q9Y294	204 aa		12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	MTO1	Q9Y2Z2	717 aa	Known RBP	12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	CFAP20	Q9Y6A4	193 aa	Known RBP	12.02	□□□□□ -0.49
PKN1-208	ENST00000586900	IGHV1OR21-1	A0A087WYE8	117 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	FAM221B	A6H8Z2	402 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	KDM1A	O60341	852 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	ALDH4A1	P30038	563 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	CCNF	P41002	786 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	SERPINB9	P50453	376 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	OR1D5	P58170	312 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	TAS2R39	P59534	338 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	ABR	Q12979	859 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	PDAP1	Q13442	181 aa	Known RBP	12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	GPR18	Q14330	331 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	PAQR3	Q6TCH7	311 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	CYHR1	Q6ZMK1	362 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	DGLUCY	Q7Z3D6	616 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	ACVR1C	Q8NER5	493 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	CAVIN3	Q969G5	261 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	FAM136A	Q96C01	138 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	TSPAN17	Q96FV3	270 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	ATXN7L3B	Q96GX2	97 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	PDLIM5	Q96HC4	596 aa	Known RBP	12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	OLFM1	Q99784	485 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	ABCG4	Q9H172	646 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	TRIT1	Q9H3H1	467 aa	Known RBP	12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	TFB2M	Q9H5Q4	396 aa	Known RBP	12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	SYTL2	Q9HCH5	934 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	SLC24A2	Q9UI40	661 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	ZNF180	Q9UJW8	692 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	KNTC1	P50748	2209 aa		12.01	□□□□□ -0.49
PKN1-208	ENST00000586900	PRAMEF33	A0A0G2JMD5	474 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	EXOC1L	A0A1B0GW35	172 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900		A0A1W2PQM1	296 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	PSIP1	O75475	530 aa	Known RBP	12	□□□□□ -0.49
PKN1-208	ENST00000586900	FAM155B	O75949	473 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	C1orf105	O95561	183 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	RPLP0	P05388	317 aa	Known RBP	12	□□□□□ -0.49
PKN1-208	ENST00000586900	INHBA	P08476	426 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	ITGA2B	P08514	1039 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	CNTF	P26441	200 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	CD1C	P29017	333 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	MSH2	P43246	934 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	SLC12A2	P55011	1212 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	IL2	P60568	153 aa		12	□□□□□ -0.49
PKN1-208	ENST00000586900	CCL7	P80098	99 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms