RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 A0A088AWK7 358 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TSPAN11A1L157 253 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 LRRC14BA6NHZ5 514 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 LRRC72A6NJI9 287 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 UBDO15205 165 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 GPC4O75487 556 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 SEMA4FO95754 770 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 ZNF30P17039 623 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 LHCGRP22888 699 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 ACSL1P33121 698 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 CREB5Q02930 508 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 CDC16Q13042 620 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 SQLEQ14534 574 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 KHDC1Q4VXA5 237 aaKnown RBP18.16■□□□□ 0.5
RETREG3-205ENST00000586870 KANK2Q63ZY3 851 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 FBXL19Q6PCT2 694 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 ADAMTSL2Q86TH1 951 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 SNX32Q86XE0 403 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 RGL4Q8IZJ4 473 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 HCAR2Q8TDS4 363 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TRPC4APQ8TEL6 797 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 WDR60Q8WVS4 1066 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 LOXL4Q96JB6 756 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 CD274Q9NZQ7 290 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 KLHL42Q9P2K6 505 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 B4GALT6Q9UBX8 382 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 L3MBTL1Q9Y468 752 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 PRSS21Q9Y6M0 314 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3DA0A087WVF3 549 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3IA0A087WXS9 549 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3EA0A087X179 549 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3KA0A087X1G2 549 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3FA6NER0 549 aaPredicted RBP18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3LB9A6J9 549 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 PLK4O00444 970 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 SLC25A14O95258 325 aaPredicted RBP18.16■□□□□ 0.5
RETREG3-205ENST00000586870 MLYCDO95822 493 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 RETP07949 1114 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 C1SP09871 688 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3HP0C7X1 549 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 C7P10643 843 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 NSG1P42857 185 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 SPINT3P49223 89 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 ATP4BP51164 291 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 HK3P52790 923 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 METAP1P53582 386 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 CNTN1Q12860 1018 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 ACSBG2Q5FVE4 666 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 LYSMD4Q5XG99 296 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3GQ6DHY5 549 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 CLEC6AQ6EIG7 209 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3CQ6IPX1 549 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 PGM2L1Q6PCE3 622 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 LARP4Q71RC2 724 aaKnown RBP eCLIP18.16■□□□□ 0.5
RETREG3-205ENST00000586870 EFL1Q7Z2Z2 1120 aaKnown RBP18.16■□□□□ 0.5
RETREG3-205ENST00000586870 TBC1D3Q8IZP1 549 aaPredicted RBP18.16■□□□□ 0.5
RETREG3-205ENST00000586870 MYO1HQ8N1T3 1032 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 CADM4Q8NFZ8 388 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 NDE1Q9NXR1 346 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 PKD2L2Q9NZM6 624 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 SERGEFQ9UGK8 458 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 SLC7A8Q9UHI5 535 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 PCTPQ9UKL6 214 aa18.16■□□□□ 0.5
RETREG3-205ENST00000586870 MUC22E2RYF6 1773 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 CACNA1HO95180 2353 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 PRR23AA6NEV1 266 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 CCNT2O60583 730 aaKnown RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 GFRA3O60609 400 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 XPAP23025 273 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 VIPR1P32241 457 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 ARHGEF7Q14155 803 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 MAPRE2Q15555 327 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 TGFBIQ15582 683 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 TTLL9Q3SXZ7 439 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 ZNF805Q5CZA5 627 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 WDR45BQ5MNZ6 344 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 GPRC6AQ5T6X5 926 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 C16orf89Q6UX73 402 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 ERN2Q76MJ5 926 aaKnown RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 ASCL5Q7RTU5 278 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 CYP2U1Q7Z449 544 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 DEFB107AQ8IZN7 70 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 ZBTB2Q8N680 514 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 KYQ8NBH2 561 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 OR56A4Q8NGH8 313 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 SNX19Q92543 992 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 ARRDC3Q96B67 414 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 C19orf60Q96EN9 201 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 CLPTM1LQ96KA5 538 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 HSPA12BQ96MM6 686 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 NSUN5Q96P11 429 aaKnown RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 NUSAP1Q9BXS6 441 aaKnown RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 RAD18Q9NS91 495 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 SPATS2LQ9NUQ6 558 aaKnown RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 NKX1-2Q9UD57 310 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 TNPO3Q9Y5L0 923 aaKnown RBP18.15■□□□□ 0.5
RETREG3-205ENST00000586870 DNAJC15Q9Y5T4 150 aa18.15■□□□□ 0.5
RETREG3-205ENST00000586870 TRIM16O95361 564 aa18.14■□□□□ 0.49
RETREG3-205ENST00000586870 PSMG1O95456 288 aa18.14■□□□□ 0.49
RETREG3-205ENST00000586870 S100BP04271 92 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms