RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 SH2D5Q6ZV89 423 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 PIWIL4Q7Z3Z4 852 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 CLEC14AQ86T13 490 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 RASGRP3Q8IV61 690 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 SPNS2Q8IVW8 549 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 CENPLQ8N0S6 344 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 MYO1HQ8N1T3 1032 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 SPDYE1Q8NFV5 336 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 PHOX2BQ99453 314 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 DUSP23Q9BVJ7 150 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 STMN4Q9H169 189 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 ACBD3Q9H3P7 528 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 TMBIM4Q9HC24 238 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 PSMD13Q9UNM6 376 aa16.58■□□□□ 0.24
PRKCSH-203ENST00000586486 KIR2DS5A0A0G2JLQ3 304 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 A0A0G2JNG1 304 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 KIR2DS3K7RE56 304 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 CDX4O14627 284 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 ATP8B1O43520 1251 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 ATP6V0D1P61421 351 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 SLC14A1Q13336 389 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 KIR2DS5Q14953 304 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 CLCA4Q14CN2 919 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 OGFOD3Q6PK18 319 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 C17orf82Q86X59 251 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 GATAD2AQ86YP4 633 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 NAGSQ8N159 534 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 SFRP1Q8N474 314 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 OR4C6Q8NH72 309 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 ZDHHC1Q8WTX9 485 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 SH3GL2Q99962 352 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 VPS11Q9H270 941 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 TMEM9BQ9NQ34 198 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 PCMTD2Q9NV79 361 aa16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 SCHIP1Q9P0W5 487 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-203ENST00000586486 CCDC189A1A4V9 331 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 KLHL2O95198 593 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 LTA4HP09960 611 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 ALPPL2P10696 532 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 PYGBP11216 843 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 MTHFD1P11586 935 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 CD1DP15813 335 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 IRF9Q00978 393 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 DLG1Q12959 904 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 SP140Q13342 867 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 SUZ12Q15022 739 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 RPE65Q16518 533 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 FAM83EQ2M2I3 478 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 DBX2Q6ZNG2 339 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 ASCL5Q7RTU5 278 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 AVL9Q8NBF6 648 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 ASB11Q8WXH4 323 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 TFGQ92734 400 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 C12orf66Q96MD2 445 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 FOPNLQ96NB1 174 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 INSM2Q96T92 566 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 NMRAL1Q9HBL8 299 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 IGSF5Q9NSI5 407 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 MKS1Q9NXB0 559 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 HEBP2Q9Y5Z4 205 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 COL5A1P20908 1838 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 OR52A4PA6NMU1 304 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 FOXO6A8MYZ6 492 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 B4DGG1 531 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 GFYI3L273 518 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 FFAR2O15552 330 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 NOBOXO60393 691 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 PSIP1O75475 530 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 C8GP07360 202 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 XRCC1P18887 633 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 KRT4P19013 534 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 GMPRP36959 345 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 SLC18A2Q05940 514 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 CSHL1Q14406 222 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 TSNAXIP1Q2TAA8 658 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 INAVAQ3KP66 663 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 ZCCHC8Q6NZY4 707 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 SRRM1Q8IYB3 904 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 GPR156Q8NFN8 814 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 KCTD4Q8WVF5 259 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 SKA2Q8WVK7 121 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 CENPHQ9H3R5 247 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 RXFP3Q9NSD7 469 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 POT1Q9NUX5 634 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 ZNF624Q9P2J8 865 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 ACTL7BQ9Y614 415 aa16.56■□□□□ 0.24
PRKCSH-203ENST00000586486 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 GOLGA8RI6L899 631 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 SLC16A5O15375 505 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 OPA1O60313 960 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 RPN2P04844 631 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 GSTA1P08263 222 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 NDUFS1P28331 727 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 UBE2IP63279 158 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 ABRQ12979 859 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 AASDHQ4L235 1098 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 AGBL2Q5U5Z8 902 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 ADAMTSL2Q86TH1 951 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 ARL10Q8N8L6 244 aa16.55■□□□□ 0.24
PRKCSH-203ENST00000586486 FAM181AQ8N9Y4 354 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms