RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 PRSS21Q9Y6M0 314 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 CELSR3Q9NYQ7 3312 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 ITPR1Q14643 2758 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 TCRBV9S1A1TA0A576 114 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 PMS2P1A4D2B8 440 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 FAM159BA6NKW6 160 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 CTIFO43310 598 aaKnown RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 B4GAT1O43505 415 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 C1QAP02745 245 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 ERVK-10P10266 1014 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 PKMP14618 531 aaKnown RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 XRCC1P18887 633 aaPredicted RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 SSTR1P30872 391 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 STX2P32856 288 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 PHBP35232 272 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 HALP42357 657 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 PCBP4P57723 403 aaKnown RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 GPX6P59796 221 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 CTBP1Q13363 440 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 BIRC2Q13490 618 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 NFE2L1Q14494 772 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 TERF2Q15554 542 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 PLA2G4EQ3MJ16 856 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 SOWAHCQ53LP3 525 aaPredicted RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 CTSL3PQ5NE16 218 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 HP1BP3Q5SSJ5 553 aaPredicted RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 PLEKHS1Q5SXH7 462 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 TRMT10BQ6PF06 316 aaKnown RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 FOXR1Q6PIV2 292 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 C3orf62Q6ZUJ4 267 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 MICALCLQ6ZW33 695 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 ZNF438Q7Z4V0 828 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 SPRED1Q7Z699 444 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 LDB1Q86U70 411 aaPredicted RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 DENND6AQ8IWF6 608 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 SPACA3Q8IXA5 215 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 UNC5BQ8IZJ1 945 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 FBXO39Q8N4B4 442 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 ZFPM2Q8WW38 1151 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 ASZ1Q8WWH4 475 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 PATE1Q8WXA2 126 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 KCNJ9Q92806 393 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 LIN37Q96GY3 246 aaPredicted RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 NAF1Q96HR8 494 aaKnown RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 C9orf72Q96LT7 481 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 TMEM74Q96NL1 305 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 STRADBQ9C0K7 418 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 CCDC68Q9H2F9 335 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 ANKZF1Q9H8Y5 726 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 UCK1Q9HA47 277 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 SARS2Q9NP81 518 aaKnown RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 IL1RAPL1Q9NZN1 696 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 ATXN7L1Q9ULK2 861 aaPredicted RBP9.67□□□□□ -0.86
GGA3-209ENST00000580646 NFU1Q9UMS0 254 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 DNAJC16Q9Y2G8 782 aa9.67□□□□□ -0.86
GGA3-209ENST00000580646 ADAMTS20P59510 1910 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 UBA6A0AVT1 1052 aaPredicted RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 SLC5A10A0PJK1 596 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 RHPN2P1A8MT19 583 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 EIF3FO00303 357 aaPredicted RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 PLD2O14939 933 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 PPM1DO15297 605 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 ZW10O43264 779 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 GPC4O75487 556 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 TNFSF15O95150 251 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 AHSGP02765 367 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 TUBBP07437 444 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 BRAFP15056 766 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 MCM3P25205 808 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 AOAHP28039 575 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 ALDH4A1P30038 563 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 ATP5DP30049 168 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 CCKBRP32239 447 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 MLLT3P42568 568 aaPredicted RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 GPR3P46089 330 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 CSE1LP55060 971 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 EIF3BP55884 814 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 OR1D5P58170 312 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 UBE2IP63279 158 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 TLE3Q04726 772 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 ZFP36L1Q07352 338 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 EIF3IQ13347 325 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 GBX1Q14549 363 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 CLPPQ16740 277 aaPredicted RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 PTRHD1Q6GMV3 140 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 CAPRIN2Q6IMN6 1127 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 WDR93Q6P2C0 686 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 FAM83HQ6ZRV2 1179 aaPredicted RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 TRMT10CQ7L0Y3 403 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 RAB11FIP2Q7L804 512 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 SLC9B2Q86UD5 537 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 CFAP206Q8IYR0 622 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 SLC37A2Q8TED4 501 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 ELMO1Q92556 727 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 UBXN4Q92575 508 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 SH3KBP1Q96B97 665 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 MCMBPQ9BTE3 642 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 OR52A5Q9H2C5 316 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms