RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 OR2T7P0C7T2 308 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 CTAGE8P0CG41 777 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 MYL6BP14649 208 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 ITGA2P17301 1181 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 ERCC2P18074 760 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 CHRNA7P36544 502 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 PSMC4P43686 418 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 CCR3P51677 355 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 FUT6P51993 359 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 PDX1P52945 283 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 ISL1P61371 349 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 HERV-K104P61576 105 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 RPL24P83731 157 aaKnown RBP2.4□□□□□ -2.03
COPS3-213ENST00000577210 PRKCZQ05513 592 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 ZNF718Q3SXZ3 478 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 C9orf50Q5SZB4 431 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 ERMARDQ5T6L9 678 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 TMEM198Q66K66 360 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 SLC27A1Q6PCB7 646 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 ZNF852Q6ZMS4 543 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 NUDT13Q86X67 352 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 SNX32Q86XE0 403 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 CREBRFQ8IUR6 639 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 MFN1Q8IWA4 741 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 CTAGE4Q8IX94 777 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 RYBPQ8N488 228 aaPredicted RBP2.4□□□□□ -2.03
COPS3-213ENST00000577210 SMRP1Q8NCR6 262 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 GOT1L1Q8NHS2 421 aaPredicted RBP2.4□□□□□ -2.03
COPS3-213ENST00000577210 WDR20Q8TBZ3 569 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 STAMBPL1Q96FJ0 436 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 VMP1Q96GC9 406 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 OXNAD1Q96HP4 312 aaPredicted RBP2.4□□□□□ -2.03
COPS3-213ENST00000577210 SFXN2Q96NB2 322 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 SPAG5Q96R06 1193 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 SEMA6AQ9H2E6 1030 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 OPA3Q9H6K4 179 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 NOL11Q9H8H0 719 aaKnown RBP2.4□□□□□ -2.03
COPS3-213ENST00000577210 EQTNQ9NQ60 294 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 SLC38A7Q9NVC3 462 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 COQ3Q9NZJ6 369 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 FLRT3Q9NZU0 649 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 WDR35Q9P2L0 1181 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 SLC24A2Q9UI40 661 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 SLC7A7Q9UM01 511 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 B3GALT5Q9Y2C3 310 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.4□□□□□ -2.03
COPS3-213ENST00000577210 A0A1W2PRB8 838 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 FAM170AA1A519 330 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 ANKUB1A6NFN9 424 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 BMPR1BO00238 502 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 UBE2CO00762 179 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 TO15178 435 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 PCDH7O60245 1069 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 PRKNO60260 465 aaPredicted RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 TBX10O75333 385 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 TBCAO75347 108 aaKnown RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 PSMD10O75832 226 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 ZWINTO95229 277 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 GGPS1O95749 300 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 AFPP02771 609 aaKnown RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 KRT19P08727 400 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 PLA2G4BP0C869 781 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 VDRP11473 427 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 TCEA1P23193 301 aaKnown RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 TNNT3P45378 269 aaPredicted RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 PDLIM4P50479 330 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 ASCL1P50553 236 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 MMP15P51511 669 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 LIMK1P53667 647 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 KCNJ10P78508 379 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 CAMK2DQ13557 499 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 COG2Q14746 738 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 KYNUQ16719 465 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 MDH1BQ5I0G3 518 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 SPOUT1Q5T280 376 aaKnown RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 HECTD3Q5T447 861 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 ALS2CLQ60I27 953 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 RUSC1-AS1Q66K80 236 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 KRT39Q6A163 491 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 IL27RAQ6UWB1 636 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 FAM198BQ6UWH4 519 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 PLXDC2Q6UX71 529 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.39□□□□□ -2.03
COPS3-213ENST00000577210 MFSD6Q6ZSS7 791 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 PLPPR4Q7Z2D5 763 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 PIWIL4Q7Z3Z4 852 aaKnown RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 CAMKMTQ7Z624 323 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 ZNF554Q86TJ5 538 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 AACSQ86V21 672 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 IQCHQ86VS3 1027 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 COMMD2Q86X83 199 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 FBXO39Q8N4B4 442 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 CPSF7Q8N684 471 aaKnown RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 NKAIN3Q8N8D7 197 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 TC2NQ8N9U0 490 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 OR6J1Q8NGC5 347 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 CFAP61Q8NHU2 1237 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 HMGCLL1Q8TB92 370 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 SEMA4DQ92854 862 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 VPS33AQ96AX1 596 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms