RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 DENND1AQ8TEH3 1009 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 LRRN4Q8WUT4 740 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 RELTQ969Z4 430 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 LINC00615Q96LM1 132 aaPredicted RBP8.72□□□□□ -1.01
SMG6-218ENST00000575454 PPM1MQ96MI6 270 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 RNF157Q96PX1 679 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 CHRNA10Q9GZZ6 450 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 TFB2MQ9H5Q4 396 aaKnown RBP8.72□□□□□ -1.01
SMG6-218ENST00000575454 EPS8L2Q9H6S3 715 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 UGT1A7Q9HAW7 530 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 UGT1A10Q9HAW8 530 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 UGT1A8Q9HAW9 530 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 GLOD4Q9HC38 313 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 RTN4Q9NQC3 1192 aaKnown RBP8.72□□□□□ -1.01
SMG6-218ENST00000575454 IL17CQ9P0M4 197 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 SUCOQ9UBS9 1254 aaKnown RBP8.72□□□□□ -1.01
SMG6-218ENST00000575454 FAM153AQ9UHL3 310 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 NOVA2Q9UNW9 492 aaKnown RBP8.72□□□□□ -1.01
SMG6-218ENST00000575454 NTNG1Q9Y2I2 539 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 HEY1Q9Y5J3 304 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 SPG11Q96JI7 2443 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 MED13Q9UHV7 2174 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 DCHS2Q6V1P9 2916 aa8.71□□□□□ -1.01
SMG6-218ENST00000575454 A0A0A6YYK5 440 aaPredicted RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 LOC285095A0A1B0GVY8 99 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 CCDC66A2RUB6 948 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 AGPSO00116 658 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 IFRD1O00458 451 aaPredicted RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 E2F3O00716 465 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 APOL1O14791 398 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 PMPCBO75439 489 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 PROSCO94903 275 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 MT-CYBP00156 380 aaPredicted RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 SKILP12757 684 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 ST6GAL1P15907 406 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 GJC1P36383 396 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 LMAN1P49257 510 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 ZNF169Q14929 603 aaPredicted RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 KRTAP21-3Q3LHN1 58 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 TEX44Q53QW1 395 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 PRAMEF13Q5VWM6 474 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 RPUSD3Q6P087 351 aaKnown RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 DUS1LQ6P1R4 473 aaKnown RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 TLDC1Q6P9B6 456 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 FAM180AQ6UWF9 173 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 IGFL2Q6UWQ7 119 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 RBM43Q6ZSC3 357 aaKnown RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 CDHR3Q6ZTQ4 885 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 BZW1Q7L1Q6 419 aaKnown RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 GLT6D1Q7Z4J2 308 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 PPP1R32Q7Z5V6 425 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 AMIGO1Q86WK6 493 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 VSIG1Q86XK7 387 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 PARP9Q8IXQ6 854 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 CFAP206Q8IYR0 622 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 SPDYE1Q8NFV5 336 aaPredicted RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 SPATA22Q8NHS9 363 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 ZNF398Q8TD17 642 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 HEXDCQ8WVB3 486 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 SYN2Q92777 582 aaPredicted RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 DCUN1D1Q96GG9 259 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 TRAPPC9Q96Q05 1148 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 FERD3LQ96RJ6 166 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 CEP41Q9BYV8 373 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 NAT10Q9H0A0 1025 aaKnown RBP8.71□□□□□ -1.02
SMG6-218ENST00000575454 MVB12BQ9H7P6 319 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 TXLNGQ9NUQ3 528 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 UVRAGQ9P2Y5 699 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 NAV3Q8IVL0 2385 aa8.71□□□□□ -1.02
SMG6-218ENST00000575454 ANKRD36A6QL64 1941 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 C17orf113A0A1B0GUU1 675 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 CFAP99D6REC4 459 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 BTN3A3O00478 584 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 STX7O15400 261 aaKnown RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 DDX3YO15523 660 aaKnown RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 ZSCAN9O15535 394 aaPredicted RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 POLBP06746 335 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 CBSLP0DN79 551 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 PIM1P11309 404 aaPredicted RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 COX6B1P14854 86 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 ITGAXP20702 1163 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 MMP11P24347 488 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 KDELR1P24390 212 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 CBSP35520 551 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 CD151P48509 253 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 WNT3AP56704 352 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 OTUD4Q01804 1114 aaKnown RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 HIF1AQ16665 826 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.02
SMG6-218ENST00000575454 ANO6Q4KMQ2 910 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 NKAIN1Q4KMZ8 207 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 VWA2Q5GFL6 755 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 C1orf189Q5VU69 101 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 E4F1Q66K89 784 aaPredicted RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 SLC9A4Q6AI14 798 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 MRPL14Q6P1L8 145 aaKnown RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 ALKBH5Q6P6C2 394 aaKnown RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 RPTNQ6XPR3 784 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 DET1Q7L5Y6 550 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms