RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 CCDC126Q96EE4 140 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 IMP4Q96G21 291 aaKnown RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 MYRFLQ96LU7 910 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 MAF1Q9H063 256 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 AMBNQ9NP70 447 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SMPD3Q9NY59 655 aaPredicted RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SH3BP4Q9P0V3 963 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 WDR87Q6ZQQ6 2873 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SOBPA7XYQ1 873 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 KPNA3O00505 521 aaPredicted RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 CA12O43570 354 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 HIST1H2AGP0C0S8 130 aaPredicted RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 HIST1H2ADP20671 130 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 HRH2P25021 359 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 MBTPS1Q14703 1052 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 NKG7Q16617 165 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 CYP27C1Q4G0S4 372 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 FAM171BQ6P995 826 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF549Q6P9A3 640 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SLC16A12Q6ZSM3 486 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 ADCK2Q7Z695 626 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 TSPAN33Q86UF1 283 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SERPINA9Q86WD7 417 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SCAMP4Q969E2 229 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 HIST1H2AHQ96KK5 128 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 NSMCE2Q96MF7 247 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 HIST1H2AJQ99878 128 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 H2AFJQ9BTM1 129 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 DPY30Q9C005 99 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 PARVBQ9HBI1 364 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 PMF1-BGLAPU3KQ54 211 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 TRIM64A6NGJ6 449 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 NEDD8-MDP1E9PL57 170 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 HS6ST1O60243 411 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 H2AFYO75367 372 aaKnown RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 RASAL1O95294 804 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 ESRRBO95718 433 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 ALBP02768 609 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 MYCLP1P12525 358 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 IL12AP29459 219 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 CAPGP40121 348 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 MASP1P48740 699 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 PRKAA2P54646 552 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 VBP1P61758 197 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SERINC3Q13530 473 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SIM2Q14190 667 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 TRIP4Q15650 581 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 CRY1Q16526 586 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 MOGQ16653 247 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 APCDD1Q8J025 514 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 BRSK1Q8TDC3 778 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 ADAMTS16Q8TE57 1224 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 RPL3LQ92901 407 aaKnown RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 CENPNQ96H22 339 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 APOLD1Q96LR9 279 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 MTERF1Q99551 399 aaKnown RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 CHID1Q9BWS9 393 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 ELOVL6Q9H5J4 265 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 PRKAB1Q9Y478 270 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 OAS3Q9Y6K5 1087 aaKnown RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 TCRBV5S2A0A599 114 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SLC22A3O75751 556 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 GLUD1P00367 558 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 KLKB1P03952 638 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 FGF1P05230 155 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 URODP06132 367 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 G6PDP11413 515 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 IMPDH1P20839 514 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 HOXD10P28358 340 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 RFC2P35250 354 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 MAP2K4P45985 399 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 ADAM17P78536 824 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 TRAP1Q12931 704 aaKnown RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SEMA3BQ13214 749 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 GTDC1Q4AE62 458 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF678Q5SXM1 525 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 GTF2IRD2BQ6EKJ0 949 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 LAIR1Q6GTX8 287 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 NADSYN1Q6IA69 706 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 BNIPLQ7Z465 357 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 DNAJB7Q7Z6W7 309 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 GTF2IRD2Q86UP8 949 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 MDGA1Q8NFP4 955 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 OR56A4Q8NGH8 313 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 FRS2Q8WU20 508 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 CYB5D2Q8WUJ1 264 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SELENOMQ8WWX9 145 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 MRPS31Q92665 395 aaKnown RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 HTRA1Q92743 480 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SH3YL1Q96HL8 342 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 TMEM39AQ9NV64 488 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SPASTQ9UBP0 616 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 PCDHB3Q9Y5E6 796 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SYCE1LA8MT33 242 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 UPK1AO00322 258 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 CLPXO76031 633 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 PRSS23O95084 383 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 B3GALT4O96024 378 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 LRG1P02750 347 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 GALTP07902 379 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms