RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TCAF1Q9Y4C2 921 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 RPS6KL1Q9Y6S9 549 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 ZNF891A8MT65 544 aaPredicted RBP16.82■□□□□ 0.28
SMG6-212ENST00000573153 B8ZZF3 427 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 BTN3A1O00481 513 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 FURINP09958 794 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 ARNTP27540 789 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 CXCR5P32302 372 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 MAGEA6P43360 314 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 KCNJ1P48048 391 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 CDC20Q12834 499 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 CRTC2Q53ET0 693 aaPredicted RBP16.82■□□□□ 0.28
SMG6-212ENST00000573153 DNTTIP2Q5QJE6 756 aaKnown RBP16.82■□□□□ 0.28
SMG6-212ENST00000573153 ARMC3Q5W041 872 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 AFTPHQ6ULP2 937 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 NAPRTQ6XQN6 538 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 OOSP2Q86WS3 158 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 REXO1L1PQ8IX06 675 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 ADGRF3Q8IZF5 1079 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 CARFQ8N187 725 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 PHC3Q8NDX5 983 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 STARD8Q92502 1023 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 ELMO2Q96JJ3 720 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 PBKQ96KB5 322 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 RUFY1Q96T51 708 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 TRIT1Q9H3H1 467 aaKnown RBP16.82■□□□□ 0.28
SMG6-212ENST00000573153 TFB2MQ9H5Q4 396 aaKnown RBP16.82■□□□□ 0.28
SMG6-212ENST00000573153 GPN2Q9H9Y4 310 aaPredicted RBP16.82■□□□□ 0.28
SMG6-212ENST00000573153 MARCH4Q9P2E8 410 aaPredicted RBP16.82■□□□□ 0.28
SMG6-212ENST00000573153 ICKQ9UPZ9 632 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 COLEC10Q9Y6Z7 277 aa16.82■□□□□ 0.28
SMG6-212ENST00000573153 TENM4Q6N022 2769 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.81■□□□□ 0.28
SMG6-212ENST00000573153 TCRBV7S3A2A0A539 114 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 POLR2CP19387 275 aaPredicted RBP16.81■□□□□ 0.28
SMG6-212ENST00000573153 TPSB2P20231 275 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 TUBB3Q13509 450 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 TPSAB1Q15661 275 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 PCID2Q5JVF3 399 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 C6orf15Q6UXA7 325 aaPredicted RBP16.81■□□□□ 0.28
SMG6-212ENST00000573153 ZNF517Q6ZMY9 492 aaPredicted RBP16.81■□□□□ 0.28
SMG6-212ENST00000573153 PPP1R3BQ86XI6 285 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 SLC38A9Q8NBW4 561 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 OR4E2Q8NGC2 313 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMG6-212ENST00000573153 MENTQ9BUN1 341 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 SMARCAL1Q9NZC9 954 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 CROTQ9UKG9 612 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 PCDHGA6Q9Y5G7 932 aa16.81■□□□□ 0.28
SMG6-212ENST00000573153 H3BMH7 237 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 LIN7AO14910 233 aaPredicted RBP16.8■□□□□ 0.28
SMG6-212ENST00000573153 ST6GAL1P15907 406 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 GABRA4P48169 554 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 NPY2RP49146 381 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 CRADDP78560 199 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 ABRQ12979 859 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 GPR19Q15760 415 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 CYP1B1Q16678 543 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 PRAMEF17Q5VTA0 474 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 TTC27Q6P3X3 843 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 GSTA5Q7RTV2 222 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 LDB1Q86U70 411 aaPredicted RBP16.8■□□□□ 0.28
SMG6-212ENST00000573153 VRK3Q8IV63 474 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 ZSCAN1Q8NBB4 408 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 SIDT2Q8NBJ9 832 aaKnown RBP16.8■□□□□ 0.28
SMG6-212ENST00000573153 PPHLN1Q8NEY8 458 aaKnown RBP16.8■□□□□ 0.28
SMG6-212ENST00000573153 OR5AR1Q8NGP9 310 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 OR4L1Q8NH43 312 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 FCRL4Q96PJ5 515 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 IL22Q9GZX6 179 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 XKR8Q9H6D3 395 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 MVB12BQ9H7P6 319 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 MRM3Q9HC36 420 aaKnown RBP16.8■□□□□ 0.28
SMG6-212ENST00000573153 CHRAC1Q9NRG0 131 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 FGF21Q9NSA1 209 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 GEMIN8Q9NWZ8 242 aaKnown RBP16.8■□□□□ 0.28
SMG6-212ENST00000573153 NEU2Q9Y3R4 380 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 PCSK5Q92824 1860 aa16.8■□□□□ 0.28
SMG6-212ENST00000573153 CES2O00748 559 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 ZSCAN12O43309 604 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 ZBTB11O95625 1053 aaPredicted RBP16.79■□□□□ 0.28
SMG6-212ENST00000573153 FTH1P02794 183 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 MSL3P1P0C860 447 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 PRDX3P30048 256 aaKnown RBP16.79■□□□□ 0.28
SMG6-212ENST00000573153 PEBP1P30086 187 aaKnown RBP16.79■□□□□ 0.28
SMG6-212ENST00000573153 CCR7P32248 378 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 HSD11B2P80365 405 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 BASP1P80723 227 aaKnown RBP16.79■□□□□ 0.28
SMG6-212ENST00000573153 NFKB2Q00653 900 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 PLOD1Q02809 727 aaPredicted RBP16.79■□□□□ 0.28
SMG6-212ENST00000573153 GRB7Q14451 532 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 LRRC8BQ6P9F7 803 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 CYB5D1Q6P9G0 228 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 ZNF449Q6P9G9 518 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 CT55Q8WUE5 264 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 TFGQ92734 400 aaPredicted RBP16.79■□□□□ 0.28
SMG6-212ENST00000573153 FERD3LQ96RJ6 166 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 NAP1L3Q99457 506 aaPredicted RBP16.79■□□□□ 0.28
SMG6-212ENST00000573153 TTC1Q99614 292 aa16.79■□□□□ 0.28
SMG6-212ENST00000573153 HGH1Q9BTY7 390 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms