RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PLCL1Q15111 1095 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 CCDC25Q86WR0 208 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 VRK3Q8IV63 474 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 CEP112Q8N8E3 955 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 LRRN4CLQ8ND94 238 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 OR10G6Q8NH81 332 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 CALML6Q8TD86 181 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 TMEM159Q96B96 161 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 AHCYL2Q96HN2 611 aaKnown RBP15.43■□□□□ 0.06
CHD3-215ENST00000572750 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.43■□□□□ 0.06
CHD3-215ENST00000572750 UCK1Q9HA47 277 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 TMEM9Q9P0T7 183 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 FBXO5Q9UKT4 447 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 VPS9D1Q9Y2B5 631 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 ENTPD2Q9Y5L3 495 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 PMS2P1A4D2B8 440 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 IFRD1O00458 451 aaPredicted RBP15.42■□□□□ 0.06
CHD3-215ENST00000572750 ZW10O43264 779 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 ESR1P03372 595 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 TYRP1P17643 537 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 MPSTP25325 297 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 ABCG1P45844 678 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 INHBCP55103 352 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 ADARP55265 1226 aaKnown RBP15.42■□□□□ 0.06
CHD3-215ENST00000572750 CAV1Q03135 178 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 PHF19Q5T6S3 580 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 ZNF449Q6P9G9 518 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 SPNS2Q8IVW8 549 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 SLITRK4Q8IW52 837 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 LMNTD2Q8IXW0 634 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 C2CD4AQ8NCU7 369 aaPredicted RBP15.42■□□□□ 0.06
CHD3-215ENST00000572750 GSDMBQ8TAX9 411 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 SEC14L1Q92503 715 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 RSC1A1Q92681 617 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 PANX3Q96QZ0 392 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 HGH1Q9BTY7 390 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 SEMA6CQ9H3T2 930 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 OGFRQ9NZT2 677 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 DMGDHQ9UI17 866 aaKnown RBP15.42■□□□□ 0.06
CHD3-215ENST00000572750 TSR3Q9UJK0 312 aaKnown RBP15.42■□□□□ 0.06
CHD3-215ENST00000572750 CDYLQ9Y232 598 aa15.42■□□□□ 0.06
CHD3-215ENST00000572750 A0A1W2PNU3 283 aaPredicted RBP15.41■□□□□ 0.06
CHD3-215ENST00000572750 BHMG1C9JSJ3 638 aaPredicted RBP15.41■□□□□ 0.06
CHD3-215ENST00000572750 UBXN7O94888 489 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 APOA4P06727 396 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 PKMP14618 531 aaKnown RBP15.41■□□□□ 0.06
CHD3-215ENST00000572750 AOAHP28039 575 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 CAPZBP47756 277 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 CARSP49589 748 aaKnown RBP15.41■□□□□ 0.06
CHD3-215ENST00000572750 KRT33BQ14525 404 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 TMED2Q15363 201 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 C3orf38Q5JPI3 329 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 ZNF549Q6P9A3 640 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 CNSTQ6PJW8 725 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 ZNF574Q6ZN55 896 aaPredicted RBP15.41■□□□□ 0.06
CHD3-215ENST00000572750 PIM3Q86V86 326 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 CNTN4Q8IWV2 1026 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 RBM12BQ8IXT5 1001 aaKnown RBP15.41■□□□□ 0.06
CHD3-215ENST00000572750 SLC22A15Q8IZD6 547 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 CACTIN-AS1Q8N1I8 211 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 RCBTB1Q8NDN9 531 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 PYROXD1Q8WU10 500 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 ASZ1Q8WWH4 475 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 CCDC74BQ96LY2 380 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 ZDHHC18Q9NUE0 388 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 HEBP2Q9Y5Z4 205 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 TEX15Q9BXT5 2789 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 SPTA1P02549 2419 aa15.41■□□□□ 0.06
CHD3-215ENST00000572750 IGHV5-10-1A0A0J9YXX1 117 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 E5RI56 91 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 H3BMM5 538 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 EIF3HO15372 352 aaKnown RBP eCLIP15.4■□□□□ 0.065e-6■■■□□ 14.9
CHD3-215ENST00000572750 HAUS5O94927 633 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 MPOP05164 745 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 CCKBRP32239 447 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 CD151P48509 253 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 GFERP55789 205 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 CBLBQ13191 982 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 OTOAQ7RTW8 1153 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 PHC3Q8NDX5 983 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 OR5AR1Q8NGP9 310 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 NCSTNQ92542 709 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 TFGQ92734 400 aaPredicted RBP15.4■□□□□ 0.06
CHD3-215ENST00000572750 NXPE2Q96DL1 559 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 TMEM74Q96NL1 305 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 FERD3LQ96RJ6 166 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 NDNQ99608 321 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 NRTNQ99748 197 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 CCDC68Q9H2F9 335 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 KIR3DX1Q9H7L2 352 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 GALPQ9UBC7 116 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 SLC24A2Q9UI40 661 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 SATB2Q9UPW6 733 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 RUVBL2Q9Y230 463 aaKnown RBP15.4■□□□□ 0.06
CHD3-215ENST00000572750 MED16Q9Y2X0 877 aa15.4■□□□□ 0.06
CHD3-215ENST00000572750 KNTC1P50748 2209 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 TRABD2BA6NFA1 517 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 GPC4O75487 556 aa15.39■□□□□ 0.05
CHD3-215ENST00000572750 PIAS1O75925 651 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms