RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 OASLQ15646 514 aaKnown RBP17.59■□□□□ 0.41
CHD3-214ENST00000572579 PLEKHS1Q5SXH7 462 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 BPHLQ86WA6 291 aaPredicted RBP17.59■□□□□ 0.41
CHD3-214ENST00000572579 ADGRF3Q8IZF5 1079 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 GLIS1Q8NBF1 620 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 TTC13Q8NBP0 860 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 ACVR1CQ8NER5 493 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 OR52E1Q8NGJ3 308 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 OR52K1Q8NGK4 314 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 OR13J1Q8NGT2 312 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 STYXQ8WUJ0 223 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 LCN9Q8WX39 176 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 ZNF778Q96MU6 729 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 KLHL25Q9H0H3 589 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 TFB2MQ9H5Q4 396 aaKnown RBP17.59■□□□□ 0.41
CHD3-214ENST00000572579 ETNK1Q9HBU6 452 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 SLC2A6Q9UGQ3 507 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 KCND3Q9UK17 655 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 TLK1Q9UKI8 766 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 TP53TG5Q9Y2B4 290 aa17.59■□□□□ 0.41
CHD3-214ENST00000572579 ZNF106Q9H2Y7 1883 aaKnown RBP17.58■□□□□ 0.41
CHD3-214ENST00000572579 MIF4GDA9UHW6 222 aaKnown RBP17.58■□□□□ 0.4
CHD3-214ENST00000572579 C21orf140B9A014 251 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 BHMG1C9JSJ3 638 aaPredicted RBP17.58■□□□□ 0.4
CHD3-214ENST00000572579 CFAP99D6REC4 459 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 CAPN1P07384 714 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 SPTBP11277 2137 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 ETS1P14921 441 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 ST6GAL1P15907 406 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 ACADLP28330 430 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 PTPN4P29074 926 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 FOXN2P32314 431 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 CACNG1Q06432 222 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 KIF5AQ12840 1032 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 IL10RAQ13651 578 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 BOP1Q14137 746 aaKnown RBP17.58■□□□□ 0.4
CHD3-214ENST00000572579 SEPT6Q14141 434 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 KCTD19Q17RG1 926 aaPredicted RBP17.58■□□□□ 0.4
CHD3-214ENST00000572579 UBL4BQ8N7F7 174 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 OR1L3Q8NH93 324 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 HEXDCQ8WVB3 486 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 PPP1R2P1Q96PQ5 205 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 PITPNM3Q9BZ71 974 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 TWSG1Q9GZX9 223 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 CHST8Q9H2A9 424 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 SRMSQ9H3Y6 488 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 POLHQ9Y253 713 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 PCDHB3Q9Y5E6 796 aa17.58■□□□□ 0.4
CHD3-214ENST00000572579 LIASO43766 372 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 OR1I1O60431 355 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 SCRG1O75711 98 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 MT-ND3P03897 115 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 CTSBP07858 339 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 NDUFS1P28331 727 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 RORAP35398 523 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 CD151P48509 253 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 ARL4DP49703 201 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 FOXK1P85037 733 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 KRT33BQ14525 404 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 ZIC1Q15915 447 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 ARMC6Q6NXE6 501 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 SYCE1Q8N0S2 351 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 CARFQ8N187 725 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 SPC24Q8NBT2 197 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 FLVCR1-AS1Q8TAF5 88 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 TFGQ92734 400 aaPredicted RBP17.57■□□□□ 0.4
CHD3-214ENST00000572579 TRAPPC9Q96Q05 1148 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 C1GALT1Q9NS00 363 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 SMARCAL1Q9NZC9 954 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 ICKQ9UPZ9 632 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 HEBP2Q9Y5Z4 205 aa17.57■□□□□ 0.4
CHD3-214ENST00000572579 GOLGA6L9A6NEM1 432 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 PMS2P54278 862 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 BRD3Q15059 726 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 LACTB2Q53H82 288 aaPredicted RBP17.56■□□□□ 0.4
CHD3-214ENST00000572579 CPZQ66K79 652 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 ZNF534Q76KX8 674 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 TMEM126BQ8IUX1 230 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 OR5AR1Q8NGP9 310 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 C1orf54Q8WWF1 131 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 HGH1Q9BTY7 390 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 GPR87Q9BY21 358 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 MVB12BQ9H7P6 319 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 FAM60AQ9NP50 221 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 LATS2Q9NRM7 1088 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 SPHK1Q9NYA1 384 aa17.56■□□□□ 0.4
CHD3-214ENST00000572579 FARSAQ9Y285 508 aaKnown RBP17.56■□□□□ 0.4
CHD3-214ENST00000572579 SLC5A10A0PJK1 596 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 GSAPA4D1B5 854 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 H3BMH7 237 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 MEN1O00255 615 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 ARHGAP6O43182 974 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 CPNE3O75131 537 aaKnown RBP17.55■□□□□ 0.4
CHD3-214ENST00000572579 SUN1O94901 812 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 AP2A2O94973 939 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 ZSCAN5DPP0CG00 497 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 CDH3P22223 829 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 MSNP26038 577 aaKnown RBP17.55■□□□□ 0.4
CHD3-214ENST00000572579 LMAN1P49257 510 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 SRSF1Q07955 248 aaKnown RBP eCLIP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms