RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 IQCF5A8MTL0 148 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 TMEM229AB2RXF0 380 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 GOLGA8KD6RF30 607 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 E7EVH7 732 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 GOLGA8TH3BQL2 631 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 DNALI1O14645 258 aaPredicted RBP8.46□□□□□ -1.06
SMG6-210ENST00000572205 UBXN7O94888 489 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 TNFSF15O95150 251 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 RPS3P23396 243 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG6-210ENST00000572205 PEBP1P30086 187 aaKnown RBP8.46□□□□□ -1.06
SMG6-210ENST00000572205 SLC5A2P31639 672 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 NPY2RP49146 381 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 TERF1P54274 439 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
SMG6-210ENST00000572205 RAB15P59190 212 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 TIAL1Q01085 375 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG6-210ENST00000572205 TRA2AQ13595 282 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG6-210ENST00000572205 SKIDA1Q1XH10 827 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 COL28A1Q2UY09 1125 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 ZNF549Q6P9A3 640 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 CERS6Q6ZMG9 384 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 NLRP9Q7RTR0 991 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 GSTA5Q7RTV2 222 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 JAMLQ86YT9 394 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 RBM12BQ8IXT5 1001 aaKnown RBP8.46□□□□□ -1.06
SMG6-210ENST00000572205 AVL9Q8NBF6 648 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 HEXDCQ8WVB3 486 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 FGF11Q92914 225 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 COL26A1Q96A83 441 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 CAPZA3Q96KX2 299 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 C9orf72Q96LT7 481 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 PWWP2AQ96N64 755 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 BBC3Q96PG8 261 aaPredicted RBP8.46□□□□□ -1.06
SMG6-210ENST00000572205 HS3ST6Q96QI5 342 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 NAP1L3Q99457 506 aaPredicted RBP8.46□□□□□ -1.06
SMG6-210ENST00000572205 SLC38A3Q99624 504 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 CCM2Q9BSQ5 444 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 B3GNT4Q9C0J1 378 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 EPB41L1Q9H4G0 881 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 ZNF768Q9H5H4 540 aaKnown RBP8.46□□□□□ -1.06
SMG6-210ENST00000572205 PRORYQ9H606 182 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 APMAPQ9HDC9 416 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 CATSPERZQ9NTU4 200 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 PISDQ9UG56 409 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 ACSL5Q9ULC5 683 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 ICKQ9UPZ9 632 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 AK5Q9Y6K8 562 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 HELZ2Q9BYK8 2649 aaKnown RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 IGHV5-51A0A0C4DH38 117 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 KRT87PA6NCN2 255 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 B4E171 279 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 H3BMH7 237 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 GOLGA8MH3BSY2 632 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 BTN3A3O00478 584 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 TERTO14746 1132 aaKnown RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 NVLO15381 856 aaKnown RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 CAPN5O15484 640 aaPredicted RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 TTI1O43156 1089 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 SEC31AO94979 1220 aaKnown RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 VAPBO95292 243 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 DLGAP3O95886 979 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 VIPP01282 170 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 C1QAP02745 245 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 GSTM1P09488 218 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 TYRP1P17643 537 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 AOAHP28039 575 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 ACTN2P35609 894 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 TSPAN7P41732 249 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 CD151P48509 253 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 KPNA2P52292 529 aaKnown RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 ADARP55265 1226 aaKnown RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 ETF1P62495 437 aaKnown RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 GSTM4Q03013 218 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 RPA4Q13156 261 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 TGIF1Q15583 401 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 ANKRD20A4Q4UJ75 823 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 PHF19Q5T6S3 580 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 KIAA1614Q5VZ46 1190 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 HIBCHQ6NVY1 386 aaPredicted RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 CILP2Q8IUL8 1156 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 SLC22A15Q8IZD6 547 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 LSMEM2Q8N112 164 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 KRT222Q8N1A0 295 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 FBXO39Q8N4B4 442 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 OR5AR1Q8NGP9 310 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 OR10G6Q8NH81 332 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 KLHL6Q8WZ60 621 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 TMEM159Q96B96 161 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 SH3KBP1Q96B97 665 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 SLC41A2Q96JW4 573 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 C12orf66Q96MD2 445 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 SLC30A3Q99726 388 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 DPYSL5Q9BPU6 564 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 MCMBPQ9BTE3 642 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 RBCK1Q9BYM8 510 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 PITPNM3Q9BZ71 974 aa8.45□□□□□ -1.06
SMG6-210ENST00000572205 XAB2Q9HCS7 855 aaKnown RBP8.45□□□□□ -1.06
SMG6-210ENST00000572205 THSD1Q9NS62 852 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms