RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 KIAA0040Q15053 153 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 CTF1Q16619 201 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 PRR23BQ6ZRT6 265 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 GIPC2Q8TF65 315 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 NSUN3Q9H649 340 aaKnown RBP17.16■□□□□ 0.34
SCARF1-205ENST00000571272 NOD1Q9Y239 953 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 ARVCFO00192 962 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 STX7O15400 261 aaKnown RBP17.15■□□□□ 0.34
SCARF1-205ENST00000571272 MITFO75030 526 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-205ENST00000571272 NDUFS2O75306 463 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 PFKLP17858 780 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 DCTP40126 519 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 IL1RL1Q01638 556 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 C9orf131Q5VYM1 1079 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 GALNT5Q7Z7M9 940 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 MSRB3Q8IXL7 192 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 PJA1Q8NG27 643 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 ZFP90Q8TF47 636 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 C8orf48Q96LL4 319 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 RDH12Q96NR8 316 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 ALPK1Q96QP1 1244 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 SCUBE2Q9NQ36 999 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 MTRRQ9UBK8 725 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 UBA2Q9UBT2 640 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-205ENST00000571272 FBXO10Q9UK96 956 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 TRIM17Q9Y577 477 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 GREB1Q4ZG55 1949 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 F5H5T6 163 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 KPNA4O00629 521 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-205ENST00000571272 FTH1P02794 183 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 AKT1P31749 480 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 HPCAL1P37235 193 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 OR1G1P47890 313 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 EIF2B2P49770 351 aaKnown RBP17.15■□□□□ 0.34
SCARF1-205ENST00000571272 IL5RAQ01344 420 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 MGAT3Q09327 533 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 DET1Q7L5Y6 550 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 RHBDF1Q96CC6 855 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 CCDC115Q96NT0 180 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 PSKH2Q96QS6 385 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 ZBTB18Q99592 522 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 SLC6A13Q9NSD5 602 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 C3orf18Q9UK00 162 aa17.15■□□□□ 0.34
SCARF1-205ENST00000571272 NUP214P35658 2090 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-205ENST00000571272 UGT2B11O75310 529 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 PCMT1P22061 227 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 SLC6A4P31645 630 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 RPS24P62847 133 aaKnown RBP17.14■□□□□ 0.34
SCARF1-205ENST00000571272 EMX1Q04741 257 aaPredicted RBP17.14■□□□□ 0.34
SCARF1-205ENST00000571272 VAC14Q08AM6 782 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 ZNF846Q147U1 533 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 PON2Q15165 354 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 SERINC5Q86VE9 423 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 EID3Q8N140 333 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 C10orf111Q8N326 155 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 AADATQ8N5Z0 425 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 KCNJ9Q92806 393 aa17.14■□□□□ 0.34
SCARF1-205ENST00000571272 COQ9O75208 318 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 CYP4B1P13584 511 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 GABARAPL2P60520 117 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 EPS8Q12929 822 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 TRAF3Q13114 568 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 RAPSNQ13702 412 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 NFE2Q16621 373 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-205ENST00000571272 ALG1LQ6GMV1 187 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 SVOPLQ8N434 492 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 UROC1Q96N76 676 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 DPY30Q9C005 99 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 HMG20AQ9NP66 347 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 NUDT4Q9NZJ9 180 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 VPS9D1Q9Y2B5 631 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 PCDHB5Q9Y5E4 795 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 RAI2Q9Y5P3 530 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 ZFP37Q9Y6Q3 630 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-205ENST00000571272 ZNF99A8MXY4 864 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-205ENST00000571272 FMO3P31513 532 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 MAP2K4P45985 399 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 CLCN7P51798 805 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 SIM2Q14190 667 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-205ENST00000571272 OXA1LQ15070 435 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 ANKRD13BQ86YJ7 626 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 DCP2Q8IU60 420 aaKnown RBP17.14■□□□□ 0.33
SCARF1-205ENST00000571272 LIX1Q8N485 282 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 OR7A2PQ8NGA2 310 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 NDNFQ8TB73 568 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 TLR8Q9NR97 1041 aaKnown RBP17.14■□□□□ 0.33
SCARF1-205ENST00000571272 TMEM45AQ9NWC5 275 aa17.14■□□□□ 0.33
SCARF1-205ENST00000571272 CBX4O00257 560 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 PFDN6O15212 129 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 FFAR2O15552 330 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 SERPINA1P01009 418 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 GSNP06396 782 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 PGRP06401 933 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 ITIH1P19827 911 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 KPNA1P52294 538 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 OXCT1P55809 520 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 IFITM3Q01628 133 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 CDK5R2Q13319 367 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 DGCR6Q14129 220 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms