RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 COL28A1Q2UY09 1125 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TBC1D25Q3MII6 688 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 Q4G0T1 1027 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ANKRD20A4Q4UJ75 823 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 GLE1Q53GS7 698 aaKnown RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ANKRD20A8PQ5CZ79 823 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 XKR3Q5GH77 459 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ANKRD20A2Q5SQ80 823 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 VWA5B1Q5TIE3 1220 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ANKRD20A1Q5TYW2 823 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ANKRD20A3Q5VUR7 823 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TWF2Q6IBS0 349 aaKnown RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 GALNT17Q6IS24 598 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ARMC6Q6NXE6 501 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 WDR73Q6P4I2 378 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 Q6ZWC4 215 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TAOK1Q7L7X3 1001 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SPATA19Q7Z5L4 167 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SFTPA1Q8IWL2 248 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 MCEMP1Q8IX19 187 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 GPR65Q8IYL9 337 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 HACE1Q8IYU2 909 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 FBXL16Q8N461 479 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 HJURPQ8NCD3 748 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CCDC148Q8NFR7 591 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 MYCBPAPQ8TBZ2 947 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 URGCPQ8TCY9 931 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 HDAC7Q8WUI4 952 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TMEM170AQ8WVE7 144 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CORO2AQ92828 525 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 FUBP1Q96AE4 644 aaKnown RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 PPP1R13BQ96KQ4 1090 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 LINC00615Q96LM1 132 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CEP295NLQ96MC4 621 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 RUNDC3BQ96NL0 473 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 KLHL5Q96PQ7 755 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 EGFL8Q99944 293 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 JPH2Q9BR39 696 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TMEM175Q9BSA9 504 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SPXQ9BT56 116 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ABHD14AQ9BUJ0 271 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ALG8Q9BVK2 526 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TEKT3Q9BXF9 490 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 GPR87Q9BY21 358 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 PCED1AQ9H1Q7 454 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 Q9N2J8 555 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 WDR6Q9NNW5 1121 aaKnown RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SLC2A4RGQ9NR83 387 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 MRPL17Q9NRX2 175 aaKnown RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 KLC4Q9NSK0 619 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 AGPAT5Q9NUQ2 364 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 OLAHQ9NV23 265 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 HAO2Q9NYQ3 351 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 DKK3Q9UBP4 350 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 XPO7Q9UIA9 1087 aaKnown RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 LEF1Q9UJU2 399 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CDH7Q9ULB5 785 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ICKQ9UPZ9 632 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 PIN4Q9Y237 131 aaKnown RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 FAM96BQ9Y3D0 163 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 LIPGQ9Y5X9 500 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SLC30A1Q9Y6M5 507 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 FANCMQ8IYD8 2048 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 VPS13AQ96RL7 3174 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 DCHS1Q96JQ0 3298 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 C2orf16Q68DN1 1984 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 DOCK8Q8NF50 2099 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CLUHO75153 1309 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 SPTBN2O15020 2390 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 DNAH14Q0VDD8 3507 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 MTCL1Q9Y4B5 1905 aaKnown RBP3.19□□□□□ -1.9
CNOT1-221ENST00000569924 CACNA1IQ9P0X4 2223 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 EDDM13A0A1B0GTR0 161 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 A0A1W2PRV1 198 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 TCRBV7S3A2A0A539 114 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 LNP1A1A4G5 178 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 TARSL2A2RTX5 802 aaKnown RBP3.19□□□□□ -1.9
CNOT1-221ENST00000569924 HTR3EA5X5Y0 456 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 KRT87PA6NCN2 255 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 CBY3A6NI87 242 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 ENO4A6NNW6 628 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 AHRRA9YTQ3 701 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 ANHXE9PGG2 379 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 ETV2O00321 342 aaPredicted RBP3.19□□□□□ -1.9
CNOT1-221ENST00000569924 PLOD2O00469 737 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 NDC80O14777 642 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 PGRMC2O15173 223 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 PROM1O43490 865 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 EDIL3O43854 480 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 PRPSAP2O60256 369 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 N4BP1O75113 896 aaKnown RBP3.19□□□□□ -1.9
CNOT1-221ENST00000569924 GPC4O75487 556 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 CSDE1O75534 798 aaKnown RBP3.19□□□□□ -1.9
CNOT1-221ENST00000569924 DDHD2O94830 711 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 NXPH3O95157 252 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 GUCA1CO95843 209 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 DDAH2O95865 285 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 GLUD1P00367 558 aa3.19□□□□□ -1.9
CNOT1-221ENST00000569924 ENO1P06733 434 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms