RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 NRG2O14511 850 aaPredicted RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 VILLO15195 856 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 RAD51BO15315 384 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 SEC22BO75396 215 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 MATN4O95460 622 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 SOD2P04179 222 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 RGS4P49798 205 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 NEK2P51955 445 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 LMAN2Q12907 356 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 NFATC2Q13469 925 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 LAPTM5Q13571 262 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 TRIM60Q495X7 471 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 DGKKQ5KSL6 1271 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 GLYATQ6IB77 296 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 RETSATQ6NUM9 610 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 PLBD1Q6P4A8 553 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 TTC33Q6PID6 262 aaPredicted RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 HACD2Q6Y1H2 254 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ZSWIM9Q86XI8 627 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 EPHX4Q8IUS5 362 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 CHERPQ8IWX8 916 aaKnown RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 AHI1Q8N157 1196 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 TMEM199Q8N511 208 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 FIBCD1Q8N539 461 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 KRTCAP2Q8N6L1 136 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 HJURPQ8NCD3 748 aaPredicted RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ADAMTS19Q8TE59 1207 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 TOP1MTQ969P6 601 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 RMND5BQ96G75 393 aaPredicted RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ZDHHC6Q9H6R6 413 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 RPF2Q9H7B2 306 aaKnown RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 VCX3AQ9NNX9 186 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 MRPL17Q9NRX2 175 aaKnown RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ABCB8Q9NUT2 735 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 SMOXQ9NWM0 555 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ACTR3BQ9P1U1 418 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 THEGQ9P2T0 379 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 INSL5Q9Y5Q6 135 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 MYO7AQ13402 2215 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 TEX28O15482 410 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 VPS4BO75351 444 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ABLIM3O94929 683 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 GSNP06396 782 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 HALP42357 657 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 BOP1Q14137 746 aaKnown RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 PRMT9Q6P2P2 845 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ADAMTSL2Q86TH1 951 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 TMEM126BQ8IUX1 230 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ADGRG5Q8IZF4 528 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ST13P5Q8NFI4 369 aaPredicted RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 CDC26Q8NHZ8 85 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 FBXO30Q8TB52 745 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF558Q96NG5 402 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 FAM126AQ9BYI3 521 aaPredicted RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 P2RY12Q9H244 342 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 DUS2Q9NX74 493 aaKnown RBP8.6□□□□□ -1.03
LINC00558-201ENST00000569422 ABCD2Q9UBJ2 740 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 OPTCQ9UBM4 332 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 MYRFQ9Y2G1 1151 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 SNX5Q9Y5X3 404 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 BACE2Q9Y5Z0 518 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 C5orf42Q9H799 3197 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 SMIM31A0A1B0GVY4 71 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 NPIPB15A6NHN6 443 aaPredicted RBP8.59□□□□□ -1.03
LINC00558-201ENST00000569422 LOC730098B7Z3J9 87 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 M0QX08 132 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 TAPBPO15533 448 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 HNRNPRO43390 633 aaKnown RBP8.59□□□□□ -1.03
LINC00558-201ENST00000569422 DFNA5O60443 496 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 LRATO95237 230 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 PAHP00439 452 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 ACRP10323 421 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 ZFP36L2P47974 494 aaKnown RBP8.59□□□□□ -1.03
LINC00558-201ENST00000569422 CLCN4P51793 760 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 MAPK10P53779 464 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 FAM174BQ3ZCQ3 159 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 PYCR3Q53H96 274 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 XKR7Q5GH72 579 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 ERAP2Q6P179 960 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 ANKRD46Q86W74 232 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 PHACTR4Q8IZ21 702 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 RBFAQ8N0V3 343 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 CRIPAKQ8N1N5 446 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 STK40Q8N2I9 435 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 GPR26Q8NDV2 337 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 BIRC7Q96CA5 298 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 ALPK1Q96QP1 1244 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF382Q96SR6 550 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 SLC52A3Q9NQ40 469 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 MBD1Q9UIS9 605 aaPredicted RBP8.59□□□□□ -1.03
LINC00558-201ENST00000569422 ANAPC2Q9UJX6 822 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 LSM7Q9UK45 103 aaKnown RBP8.59□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF490Q9ULM2 529 aaPredicted RBP8.59□□□□□ -1.03
LINC00558-201ENST00000569422 PATJQ8NI35 1801 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 THSD7BQ9C0I4 1608 aa8.59□□□□□ -1.03
LINC00558-201ENST00000569422 PITPNM1O00562 1244 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms