RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	ZFYVE1	Q9HBF4	777 aa		13.31	□□□□□ -0.28
SMG1-213	ENST00000567737	HAUS2	Q9NVX0	235 aa		13.31	□□□□□ -0.28
SMG1-213	ENST00000567737	MEMO1	Q9Y316	297 aa		13.31	□□□□□ -0.28
SMG1-213	ENST00000567737	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.31	□□□□□ -0.28
SMG1-213	ENST00000567737	PRRC2A	P48634	2157 aa	Known RBP	13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	TCRBV5S1A1T	A0A578	114 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	CFAP99	D6REC4	459 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737		H3BRJ5	948 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	SOCS6	O14544	535 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	OR2B3	O76000	313 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	KLHL18	O94889	574 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	TNFSF10	P50591	281 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	OGDH	Q02218	1023 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	FOLH1	Q04609	750 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	TMEM115	Q12893	351 aa	Predicted RBP	13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	NKAIN1	Q4KMZ8	207 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	CDHR3	Q6ZTQ4	885 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	OR4E2	Q8NGC2	313 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	CA5BP1	Q8WTZ4	195 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	NRGN	Q92686	78 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	C12orf66	Q96MD2	445 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	PEBP4	Q96S96	227 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	KLHL25	Q9H0H3	589 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	NDST4	Q9H3R1	872 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	KIR3DX1	Q9H7L2	352 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	DHCR7	Q9UBM7	475 aa	Known RBP	13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	ATP6V1D	Q9Y5K8	247 aa		13.3	□□□□□ -0.28
SMG1-213	ENST00000567737	NUP210L	Q5VU65	1888 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	CNTRL	Q7Z7A1	2325 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	FOXO6	A8MYZ6	492 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	ANKRD66	B4E2M5	251 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	PRPSAP2	O60256	369 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	POP7	O75817	140 aa	Known RBP	13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	SLC4A1	P02730	911 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	PSMA2	P25787	234 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	NDUFS1	P28331	727 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	PRDX3	P30048	256 aa	Known RBP	13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	SERPINB6	P35237	376 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	ARL4A	P40617	200 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	NFE2L1	Q14494	772 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	KRT33B	Q14525	404 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	IHH	Q14623	411 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	CLEC16A	Q2KHT3	1053 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	ALG1L	Q6GMV1	187 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	DESI1	Q6ICB0	168 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737		Q71RC1	249 aa	Predicted RBP	13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	MON1B	Q7L1V2	547 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	PSTK	Q8IV42	348 aa	Known RBP	13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	TMEM151B	Q8IW70	566 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	BRSK1	Q8TDC3	778 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	ZNF653	Q96CK0	615 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	EID2B	Q96D98	161 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	INSM2	Q96T92	566 aa	Predicted RBP	13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	PCDHB18P	Q96TA0	734 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	ZNF559	Q9BR84	538 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	MRM3	Q9HC36	420 aa	Known RBP	13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	RWDD2A	Q9UIY3	292 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	HS3ST3B1	Q9Y662	390 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	COLEC10	Q9Y6Z7	277 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	SEC16A	O15027	2179 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	CACNA1C	Q13936	2221 aa		13.29	□□□□□ -0.28
SMG1-213	ENST00000567737	C17orf113	A0A1B0GUU1	675 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	RNF8	O76064	485 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	AMPD1	P23109	780 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	SYCP1	Q15431	976 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	RBBP7	Q16576	425 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	VWA3B	Q502W6	1294 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	KIRREL2	Q6UWL6	708 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	CXXC5	Q7LFL8	322 aa	Known RBP	13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	HSCB	Q8IWL3	235 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	BEND7	Q8N7W2	519 aa	Predicted RBP	13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	SUN3	Q8TAQ9	357 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	VPS35	Q96QK1	796 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	ADGRE3	Q9BY15	652 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	PITPNM3	Q9BZ71	974 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	WWP1	Q9H0M0	922 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	SRMS	Q9H3Y6	488 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	SEPT11	Q9NVA2	429 aa	Known RBP	13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	ETNK2	Q9NVF9	386 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	IRAK4	Q9NWZ3	460 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	PLA2G3	Q9NZ20	509 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	DOCK10	Q96BY6	2186 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	ACAN	P16112	2415 aa		13.28	□□□□□ -0.28
SMG1-213	ENST00000567737	CCDC88C	Q9P219	2028 aa		13.27	□□□□□ -0.28
SMG1-213	ENST00000567737	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	PES1	O00541	588 aa	Known RBP	13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	ZSCAN9	O15535	394 aa	Predicted RBP	13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	PRAMEF2	O60811	474 aa		13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	UQCRH	P07919	91 aa		13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	PVR	P15151	417 aa		13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	PBLD	P30039	288 aa	Predicted RBP	13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	CEBPE	Q15744	281 aa		13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	CAMK4	Q16566	473 aa		13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	CES4A	Q5XG92	561 aa		13.27	□□□□□ -0.29
SMG1-213	ENST00000567737	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms