RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 FER1L5A0AVI2 2057 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 OR5K3A6NET4 321 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 TLCD2A6NGC4 264 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 OR51F1A6NGY5 319 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 ESPNB1AK53 854 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 AP3B1O00203 1094 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 LIN7AO14910 233 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 NKX2-8O15522 239 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 SPAG6O75602 509 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 KIAA0754O94854 1291 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 ZBTB11O95625 1053 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 GOT2P00505 430 aaKnown RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 FTH1P02794 183 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 MT-ND3P03897 115 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 OR56A5P0C7T3 313 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 ZSCAN5DPP0CG00 497 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 FOLR1P15328 257 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 POLR2CP19387 275 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 CXCR5P32302 372 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 FOXN2P32314 431 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PREPP48147 710 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 NPY2RP49146 381 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PPP1CAP62136 330 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PRAMEP78395 509 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 CCZ1BP86790 482 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 CCZ1P86791 482 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 CDK16Q00536 496 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 MC1RQ01726 317 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PLOD1Q02809 727 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 ACY1Q03154 408 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 ACVR1Q04771 509 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PRKAA1Q13131 559 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 ITIH4Q14624 930 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 KCNAB1Q14722 419 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 BRD3Q15059 726 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PCID2Q5JVF3 399 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 TMTC4Q5T4D3 741 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PWWP2BQ6NUJ5 590 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 DUS1LQ6P1R4 473 aaKnown RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 AFTPHQ6ULP2 937 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PACS1Q6VY07 963 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 MICALCLQ6ZW33 695 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 UNC5BQ8IZJ1 945 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 CARFQ8N187 725 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 D2HGDHQ8N465 521 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 GALNT6Q8NCL4 622 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 OR13J1Q8NGT2 312 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 OR4L1Q8NH43 312 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 OR8K5Q8NH50 307 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 ELMO1Q92556 727 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 TFGQ92734 400 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 SEMA4CQ9C0C4 833 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 TFB2MQ9H5Q4 396 aaKnown RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 EIF2B3Q9NR50 452 aaKnown RBP6.73□□□□□ -1.33
SF3B3-209ENST00000567635 CHRAC1Q9NRG0 131 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 FGF21Q9NSA1 209 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 BFARQ9NZS9 450 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 SLC2A6Q9UGQ3 507 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 RARRES3Q9UL19 164 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PADI1Q9ULC6 663 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 PRSS21Q9Y6M0 314 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 RPS6KL1Q9Y6S9 549 aa6.73□□□□□ -1.33
SF3B3-209ENST00000567635 SLC9B1P1A6NJY1 282 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 B8ZZF3 427 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 BHMG1C9JSJ3 638 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 MATN2O00339 956 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 CD3EAPO15446 510 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 MAP3K7O43318 606 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 OR1I1O60431 355 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 FAM87AP0C7U9 286 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 EBLN1P0CF75 366 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 ZNF28P17035 718 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 CDH3P22223 829 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 ACADLP28330 430 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 PRDX3P30048 256 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 DLSTP36957 453 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 STAT5AP42229 794 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 KCNJ1P48048 391 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 ARCN1P48444 511 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 KPNA2P52292 529 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 SESN2P58004 480 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 TUBB4BP68371 445 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 BASP1P80723 227 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 PRKG2Q13237 762 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 TUBB3Q13509 450 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 TUBB2AQ13885 445 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 BOP1Q14137 746 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 FASTKD1Q53R41 847 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 AARS2Q5JTZ9 985 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 BORAQ6PGQ7 559 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 AMIGO1Q86WK6 493 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 PPHLN1Q8NEY8 458 aaKnown RBP6.72□□□□□ -1.33
SF3B3-209ENST00000567635 PEX13Q92968 403 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 RNF31Q96EP0 1072 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 STAMBPL1Q96FJ0 436 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 PBKQ96KB5 322 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 ZNF778Q96MU6 729 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 CATSPER2Q96P56 530 aa6.72□□□□□ -1.33
SF3B3-209ENST00000567635 TUBB2BQ9BVA1 445 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms