RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 PARP15Q460N3 678 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 TRNP1Q6NT89 227 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 CERS6Q6ZMG9 384 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 B4GALNT4Q76KP1 1039 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 HSD11B1LQ7Z5J1 315 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 ZDHHC17Q8IUH5 632 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 SLC35F6Q8N357 371 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 RNF10Q8N5U6 811 aaKnown RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 SIMC1Q8NDZ2 872 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 CATSPER1Q8NEC5 780 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 OR2Y1Q8NGV0 311 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 SUN3Q8TAQ9 357 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 ALS2CR12Q96Q35 445 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 SECISBP2Q96T21 854 aaKnown RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 SYTL2Q9HCH5 934 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 GPATCH2LQ9NWQ4 482 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 FBXL4Q9UKA2 621 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 ADAM21Q9UKJ8 722 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 HCFC1P51610 2035 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 CCDC66A2RUB6 948 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 TMEM191CA6NGB0 347 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 C2CD4BA6NLJ0 364 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 IDSB3KWA1 339 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 ZNF500O60304 480 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-216ENST00000567071 CPP00450 1065 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 IFNA2P01563 188 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 ATP1A1P05023 1023 aaKnown RBP9.41□□□□□ -0.9
CAPN3-216ENST00000567071 UQCRHP07919 91 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 TNNT1P13805 278 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 IDSP22304 550 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 PSMA2P25787 234 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 MST1P26927 711 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 CLCNKAP51800 687 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 HADHBP55084 474 aaKnown RBP9.41□□□□□ -0.9
CAPN3-216ENST00000567071 CDO1Q16878 200 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 PRAMEF17Q5VTA0 474 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 SYT10Q6XYQ8 523 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 PPP1R32Q7Z5V6 425 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 DAAM2Q86T65 1068 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 SPPL2CQ8IUH8 684 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 LRRC57Q8N9N7 239 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 ASB5Q8WWX0 329 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 RXFP2Q8WXD0 754 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 NT5C3BQ969T7 300 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 NACC2Q96BF6 587 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 WDR24Q96S15 920 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.41□□□□□ -0.9
CAPN3-216ENST00000567071 LIME1Q9H400 295 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 SLC40A1Q9NP59 571 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 SLC6A20Q9NP91 592 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 KLC4Q9NSK0 619 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 IFT80Q9P2H3 777 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-216ENST00000567071 IP6K2Q9UHH9 426 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 CD84Q9UIB8 345 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 SERTAD3Q9UJW9 196 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 TMEM59LQ9UK28 342 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 PPT2Q9UMR5 302 aa9.41□□□□□ -0.9
CAPN3-216ENST00000567071 CHD3Q12873 2000 aaKnown RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 FAM237BA0A1B0GVD1 139 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 TMEM150CB9EJG8 249 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 E9PLN8 166 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 MYO1FO00160 1098 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 SPOPO43791 374 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 PROSCO94903 275 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 SOD1P00441 154 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 HOXD4P09016 255 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 ABOP16442 354 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 SDC4P31431 198 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 GJC1P36383 396 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 SSR1P43307 286 aaKnown RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 AP1S1P61966 158 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 PPP1CAP62136 330 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 ETF1P62495 437 aaKnown RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 ATP11AP98196 1134 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 ABRQ12979 859 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 MMRN1Q13201 1228 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 INSCQ1MX18 579 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 C15orf59Q2T9L4 293 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 DEFB113Q30KQ7 82 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 RAB6CQ53S08 254 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 ARTNQ5T4W7 220 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 MANEALQ5VSG8 457 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 C11orf63Q6NUN7 778 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 ARMC6Q6NXE6 501 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 Q6ZPB1 254 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 USP45Q70EL2 814 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 PEX26Q7Z412 305 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 CLYBLQ8N0X4 340 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 CARFQ8N187 725 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 TRIM58Q8NG06 486 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 ZNF592Q92610 1267 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 COX14Q96I36 57 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 THOC3Q96J01 351 aaKnown RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 CFAP57Q96MR6 1250 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 VKORC1Q9BQB6 163 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 CINPQ9BW66 212 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 KLC2Q9H0B6 622 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 RAB6CQ9H0N0 254 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms