RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 IMPDH1P20839 514 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 ALDH18A1P54886 795 aaKnown RBP18.33■□□□□ 0.52
COMMD4-213ENST00000565834 ABCE1P61221 599 aaKnown RBP18.33■□□□□ 0.52
COMMD4-213ENST00000565834 HERVK_113P63132 956 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 TERF2Q15554 542 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 METRNLQ641Q3 311 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 C1orf210Q8IVY1 113 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 SLC22A18ASQ8N1D0 253 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 L3HYPDHQ96EM0 354 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 KLHDC7BQ96G42 594 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 CCT8L2Q96SF2 557 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 ERVK-6Q9BXR3 956 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 PDE10AQ9Y233 779 aa18.33■□□□□ 0.52
COMMD4-213ENST00000565834 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 STX16-NPEPL1H3BU86 382 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 STX16O14662 325 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 PSIP1O75475 530 aaKnown RBP18.32■□□□□ 0.52
COMMD4-213ENST00000565834 GUCA1CO95843 209 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 FAM107AO95990 144 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 CATP04040 527 aaKnown RBP18.32■□□□□ 0.52
COMMD4-213ENST00000565834 HIST1H2AGP0C0S8 130 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-213ENST00000565834 HIST1H2ADP20671 130 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 RPIAP49247 311 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 SRP54P61011 504 aaKnown RBP18.32■□□□□ 0.52
COMMD4-213ENST00000565834 OCRLQ01968 901 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 RCN2Q14257 317 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 ZNF678Q5SXM1 525 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 RASGRP3Q8IV61 690 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 TMEFF1Q8IYR6 380 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 TMEM105Q8N8V8 129 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 PDPRQ8NCN5 879 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 MCOLN3Q8TDD5 553 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 TSACCQ96A04 125 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-213ENST00000565834 HIST1H2AHQ96KK5 128 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 C7orf26Q96N11 449 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 HIST1H2AJQ99878 128 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 EGFL8Q99944 293 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 H2AFJQ9BTM1 129 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 OR52A5Q9H2C5 316 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 OSGEPL1Q9H4B0 414 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 ZNF395Q9H8N7 513 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-213ENST00000565834 ACSS2Q9NR19 701 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 GPR27Q9NS67 375 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 ACSL5Q9ULC5 683 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 KCNK6Q9Y257 313 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 SLCO1B1Q9Y6L6 691 aa18.32■□□□□ 0.52
COMMD4-213ENST00000565834 ITM2AO43736 263 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 NPHS1O60500 1241 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 LYPLA1O75608 230 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-213ENST00000565834 MAP4P27816 1152 aaKnown RBP18.31■□□□□ 0.52
COMMD4-213ENST00000565834 CSTF1Q05048 431 aaKnown RBP18.31■□□□□ 0.52
COMMD4-213ENST00000565834 SETDB1Q15047 1291 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 ALG11Q2TAA5 492 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 RD3Q7Z3Z2 195 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 PDZD3Q86UT5 571 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 LONP2Q86WA8 852 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 BCAS4Q8TDM0 211 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 PPP4R1Q8TF05 950 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 MOCOSQ96EN8 888 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 C20orf27Q9GZN8 174 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 DRC3Q9H069 523 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 MIR1-1HGQ9H1L0 117 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 DUSP15Q9H1R2 295 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-213ENST00000565834 ARL15Q9NXU5 204 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 SPTY2D1-AS1A0A0U1RR47 76 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 ARHGEF33A8MVX0 844 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 SCAMP1O15126 338 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 SUPT7LO94864 414 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 SIX3O95343 332 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-213ENST00000565834 HSPA4LO95757 839 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 ANXA5P08758 320 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 SLC35G4P0C7Q5 338 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 MAOBP27338 520 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 CD38P28907 300 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 EEF1DP29692 281 aaKnown RBP18.31■□□□□ 0.52
COMMD4-213ENST00000565834 SERPINB5P36952 375 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 AP1S2P56377 157 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 RACK1P63244 317 aaKnown RBP18.31■□□□□ 0.52
COMMD4-213ENST00000565834 CDKL1Q00532 357 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 CDKL4Q5MAI5 379 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 SULT1C3Q6IMI6 304 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 DCP2Q8IU60 420 aaKnown RBP18.31■□□□□ 0.52
COMMD4-213ENST00000565834 HID1Q8IV36 788 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 MFSD2AQ8NA29 543 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 CNDP1Q96KN2 507 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 PLEKHM1Q9Y4G2 1056 aa18.31■□□□□ 0.52
COMMD4-213ENST00000565834 MUC3AQ02505 3323 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 NDUFAB1O14561 156 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 ACADLP28330 430 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 ARRB2P32121 409 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 AGTR2P50052 363 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 LRP8Q14114 963 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 UNC50Q53HI1 259 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 WDR45BQ5MNZ6 344 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 UNC5DQ6UXZ4 953 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 FRMD7Q6ZUT3 714 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 LPCAT2Q7L5N7 544 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 CRLF3Q8IUI8 442 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 MAML2Q8IZL2 1156 aaPredicted RBP18.3■□□□□ 0.52
COMMD4-213ENST00000565834 DTWD2Q8NBA8 298 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms