RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 C9orf62Q8N4C0 152 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ARL14Q8N4G2 192 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 PARP16Q8N5Y8 322 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CELF2-AS1Q8N7Q2 184 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 YIPF7Q8N8F6 280 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 PI4KAP1Q8N8J0 262 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 C4orf32Q8N8J7 132 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CHDHQ8NE62 594 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 FBXO36Q8NEA4 188 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ZSWIM2Q8NEG5 633 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF555Q8NEP9 628 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 DMBX1Q8NFW5 382 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 OR6X1Q8NH79 312 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ITFG1Q8TB96 612 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SPPL3Q8TCT6 385 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 GRIN3AQ8TCU5 1115 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 RAET1EQ8TD07 263 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CYGBQ8WWM9 190 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 LRTOMTQ8WZ04 291 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 KAT5Q92993 513 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 HGDQ93099 445 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 FUBP1Q96AE4 644 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CREB3L1Q96BA8 519 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ROPN1LQ96C74 230 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 LGALS12Q96DT0 336 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ELP4Q96EB1 424 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 GJD4Q96KN9 370 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 DMRTB1Q96MA1 342 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 Q96MT0 163 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 WDFY2Q96P53 400 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 STRBPQ96SI9 672 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 NELL2Q99435 816 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 P2RY13Q9BPV8 354 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SLC30A2Q9BRI3 323 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 LXNQ9BS40 222 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ZDHHC5Q9C0B5 715 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 MIXL1Q9H2W2 232 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 C12orf65Q9H3J6 166 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CCDC86Q9H6F5 360 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ARMT1Q9H993 441 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CHMP1AQ9HD42 196 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 POLE4Q9NR33 117 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ASAH2Q9NR71 780 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 TBC1D13Q9NVG8 400 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 OPTCQ9UBM4 332 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SCP2D1Q9UJQ7 156 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 FBXO10Q9UK96 956 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 STAP1Q9ULZ2 295 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 MGAT4AQ9UM21 535 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 PCDHA6Q9UN73 950 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SNX6Q9UNH7 406 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 KCNJ14Q9UNX9 436 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ERVW-1Q9UQF0 538 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 TP53TG5Q9Y2B4 290 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 MRPS23Q9Y3D9 190 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 BACE2Q9Y5Z0 518 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 DGKBQ9Y6T7 804 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 FAM205AQ6ZU69 1335 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CNTNAP4Q9C0A0 1308 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 BRWD3Q6RI45 1802 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 UBR1Q8IWV7 1749 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 NWD2Q9ULI1 1742 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 RGPD8O14715 1765 aaPredicted RBP6.19□□□□□ -1.42
PTPN9-204ENST00000564970 RGPD5Q99666 1765 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 A0A1W2PPL8 197 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 BCLAF3A2AJT9 711 aaKnown RBP6.19□□□□□ -1.42
PTPN9-204ENST00000564970 ARHGEF33A8MVX0 844 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF879B4DU55 563 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 TRIM49D1C9J1S8 452 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 H0YIV9 168 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 AIPO00170 330 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 DLGAP1O14490 977 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 SOCS2O14508 198 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 SMAD6O43541 496 aaKnown RBP6.19□□□□□ -1.42
PTPN9-204ENST00000564970 UGDHO60701 494 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 NDUFS6O75380 124 aaKnown RBP6.19□□□□□ -1.42
PTPN9-204ENST00000564970 SLC43A1O75387 559 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 VPS26AO75436 327 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 RAD17O75943 681 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 KRT33AO76009 404 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 PAPSS2O95340 614 aaPredicted RBP6.19□□□□□ -1.42
PTPN9-204ENST00000564970 RAB3DO95716 219 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 ITGAVP06756 1048 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 PRPS2P11908 318 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 CKMT1AP12532 417 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 IFI30P13284 250 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 FOLR2P14207 255 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 CAPN3P20807 821 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 CD72P21854 359 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 PCMT1P22061 227 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 CBLP22681 906 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 LAP3P28838 519 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 CRABP1P29762 137 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 FMO4P31512 558 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 GNALP38405 381 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 RPS19P39019 145 aaKnown RBP6.19□□□□□ -1.42
PTPN9-204ENST00000564970 IL15P40933 162 aaPredicted RBP6.19□□□□□ -1.42
PTPN9-204ENST00000564970 PIK3CBP42338 1070 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 DPP6P42658 865 aa6.19□□□□□ -1.42
PTPN9-204ENST00000564970 PPP3CCP48454 512 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms