RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 RIBC2Q9H4K1 309 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 PADI3Q9ULW8 664 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 MYBPHLA2RUH7 354 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 GOLGA8CPA6NN73 597 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 BCKDKO14874 412 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 TEX28O15482 410 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 RECQL5O94762 991 aaPredicted RBP16.01■□□□□ 0.15
LINC00554-201ENST00000564841 IFI30P13284 250 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 BRCC3P46736 316 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 NRG1Q02297 640 aaPredicted RBP16.01■□□□□ 0.15
LINC00554-201ENST00000564841 BRMS1LQ5PSV4 323 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 HECTD2Q5U5R9 776 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 SLX4IPQ5VYV7 408 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 PAQR9Q6ZVX9 377 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 NRARPQ7Z6K4 114 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 NSMCE4AQ9NXX6 385 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 TRPV2Q9Y5S1 764 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 NCF1BA6NI72 391 aaPredicted RBP16.01■□□□□ 0.15
LINC00554-201ENST00000564841 NCF1CA8MVU1 366 aaPredicted RBP16.01■□□□□ 0.15
LINC00554-201ENST00000564841 ZW10O43264 779 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 SEMA3DO95025 777 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 NCF1P14598 390 aaPredicted RBP16.01■□□□□ 0.15
LINC00554-201ENST00000564841 TGFBR2P37173 567 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 HTRA3P83110 453 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 POU4F1Q01851 419 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 MVKQ03426 396 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 SV2CQ496J9 727 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 TRAF7Q6Q0C0 670 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 ENTPD7Q9NQZ7 604 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 TMEFF2Q9UIK5 374 aaPredicted RBP16.01■□□□□ 0.15
LINC00554-201ENST00000564841 STAP1Q9ULZ2 295 aa16.01■□□□□ 0.15
LINC00554-201ENST00000564841 ISPDA4D126 451 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 ARL5CA6NH57 179 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 H0Y626 953 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 DSCR3O14972 297 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 PRKD3O94806 890 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 TRIM16O95361 564 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 CYBBP04839 570 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 THP07101 528 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 ZNF37AP17032 561 aaPredicted RBP16■□□□□ 0.15
LINC00554-201ENST00000564841 HTR1EP28566 365 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 TP53BP2Q13625 1128 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 RCAN2Q14206 197 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 GBX1Q14549 363 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 IRF3Q14653 427 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 ZNF181Q2M3W8 571 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 AHSA2Q719I0 299 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 HID1Q8IV36 788 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 CNTN4Q8IWV2 1026 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 TBL1YQ9BQ87 522 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 ACOT13Q9NPJ3 140 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 ADRA1BP35368 520 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 POLR2JP52435 117 aaKnown RBP16■□□□□ 0.15
LINC00554-201ENST00000564841 HERVK_113P63132 956 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 SLC35A2P78381 396 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 OR4D1Q15615 310 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 CLEC20AQ6ZU45 233 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 TMEM199Q8N511 208 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 DTX3Q8N9I9 347 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 SPERTQ8NA61 448 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 OR2T11Q8NH01 316 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 ADAM2Q99965 735 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 ERVK-6Q9BXR3 956 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 CLPBQ9H078 707 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 POLR3BQ9NW08 1133 aaPredicted RBP16■□□□□ 0.15
LINC00554-201ENST00000564841 VNN3Q9NY84 501 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 METTL15A6NJ78 407 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 SEPT4O43236 478 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 SLC22A3O75751 556 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 MATN4O95460 622 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 MOCS2O96007 188 aaPredicted RBP16■□□□□ 0.15
LINC00554-201ENST00000564841 ANXA6P08133 673 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 GADD45AP24522 165 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 EEFSECP57772 596 aaKnown RBP16■□□□□ 0.15
LINC00554-201ENST00000564841 SLAMF1Q13291 335 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 MADCAM1Q13477 382 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 TBRG1Q3YBR2 411 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 ZNF438Q7Z4V0 828 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 CYP4Z1Q86W10 505 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 CCDC126Q96EE4 140 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 Q96MT0 163 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 LRRC3Q9BY71 257 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 TKTL2Q9H0I9 626 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 IKZF5Q9H5V7 419 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 KAT8Q9H7Z6 458 aaKnown RBP16■□□□□ 0.15
LINC00554-201ENST00000564841 EHD3Q9NZN3 535 aa16■□□□□ 0.15
LINC00554-201ENST00000564841 TTC3P53804 2025 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 KRT87PA6NCN2 255 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 ENPP3O14638 875 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 CRCPO75575 148 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 SCO1O75880 301 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 MLYCDO95822 493 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 PTTG1O95997 202 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 CBLP22681 906 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 DCTP40126 519 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 HTR2BP41595 481 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 KPNA2P52292 529 aaKnown RBP15.99■□□□□ 0.15
LINC00554-201ENST00000564841 EMX2Q04743 252 aa15.99■□□□□ 0.15
LINC00554-201ENST00000564841 SYT6Q5T7P8 510 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms