RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ARL4DP49703 201 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 TMPRSS15P98073 1019 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 SRSF11Q05519 484 aaKnown RBP10.02□□□□□ -0.81
SF3B3-204ENST00000563739 ELOAQ14241 798 aaKnown RBP10.02□□□□□ -0.81
SF3B3-204ENST00000563739 KRT81Q14533 505 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 SSPNQ14714 243 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 SLC14A2Q15849 920 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 PCSK7Q16549 785 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 C1orf189Q5VU69 101 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 RHBDD2Q6NTF9 364 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 PPP1R2P3Q6NXS1 205 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 KLHL35Q6PF15 583 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 NPNTQ6UXI9 565 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 FAM151BQ6UXP7 276 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 GDF7Q7Z4P5 450 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 ADGRF3Q8IZF5 1079 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 ZADH2Q8N4Q0 377 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 CCDC120Q96HB5 630 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 SPSB2Q99619 263 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 GORASP1Q9BQQ3 440 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 ADGRE3Q9BY15 652 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 GPR63Q9BZJ6 419 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 SPRTNQ9H040 489 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-204ENST00000563739 COPG2Q9UBF2 871 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 DHCR7Q9UBM7 475 aaKnown RBP10.02□□□□□ -0.81
SF3B3-204ENST00000563739 ANAPC7Q9UJX3 599 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 FBXL4Q9UKA2 621 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 KLF2Q9Y5W3 355 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-204ENST00000563739 HS3ST3B1Q9Y662 390 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 HEATR9A2RTY3 570 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 MGAT4DA6NG13 374 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 PCDH17O14917 1159 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 NDST3O95803 873 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 CYP1A2P05177 515 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 SNRPB2P08579 225 aaKnown RBP10.01□□□□□ -0.81
SF3B3-204ENST00000563739 PEBP1P30086 187 aaKnown RBP10.01□□□□□ -0.81
SF3B3-204ENST00000563739 PTGER4P35408 488 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 GJC1P36383 396 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 PER3P56645 1201 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 ADORA2A-AS1P86434 159 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 XRCC4Q13426 336 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 PIGHQ14442 188 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-204ENST00000563739 ASIC2Q16515 512 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 BCL7AQ4VC05 210 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 TMTC4Q5T4D3 741 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 SPNS3Q6ZMD2 512 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 BNC2Q6ZN30 1099 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-204ENST00000563739 DET1Q7L5Y6 550 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 DTWD1Q8N5C7 304 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 CLEC1AQ8NC01 280 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 ACBD4Q8NC06 268 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 CATSPER1Q8NEC5 780 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 OR4E2Q8NGC2 313 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 OR2L2Q8NH16 312 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 ZFPM2Q8WW38 1151 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 RAPGEF5Q92565 580 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 FER1L6-AS2Q96M78 137 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 DPH2Q9BQC3 489 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-204ENST00000563739 SLC25A51Q9H1U9 297 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 OR52A5Q9H2C5 316 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 RAD18Q9NS91 495 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 G3BP2Q9UN86 482 aaKnown RBP10.01□□□□□ -0.81
SF3B3-204ENST00000563739 DNMT3AQ9Y6K1 912 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-204ENST00000563739 ACANP16112 2415 aa10.01□□□□□ -0.81
SF3B3-204ENST00000563739 LOC285095A0A1B0GVY8 99 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 C9J4A7 227 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 E7EQ34 232 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 AGPSO00116 658 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 KLHL18O94889 574 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 ALPPP05187 535 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 MYBL1P10243 752 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 HOXB4P17483 251 aaPredicted RBP10□□□□□ -0.81
SF3B3-204ENST00000563739 VCLP18206 1134 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 SPAM1P38567 509 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 FOLR3P41439 243 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 MYL5Q02045 173 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 NAA30Q147X3 362 aaPredicted RBP10□□□□□ -0.81
SF3B3-204ENST00000563739 ZNF169Q14929 603 aaPredicted RBP10□□□□□ -0.81
SF3B3-204ENST00000563739 ZNF630Q2M218 657 aaPredicted RBP10□□□□□ -0.81
SF3B3-204ENST00000563739 FNBP1LQ5T0N5 605 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 MLIPQ5VWP3 458 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 B3GNTL1Q67FW5 361 aaPredicted RBP10□□□□□ -0.81
SF3B3-204ENST00000563739 SLC9A4Q6AI14 798 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 NT5DC3Q86UY8 548 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 OR52E1Q8NGJ3 308 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 BRSK1Q8TDC3 778 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 OXNAD1Q96HP4 312 aaPredicted RBP10□□□□□ -0.81
SF3B3-204ENST00000563739 MRGPRX2Q96LB1 330 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 LINC00615Q96LM1 132 aaPredicted RBP10□□□□□ -0.81
SF3B3-204ENST00000563739 AGAP3Q96P47 875 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 IP6K3Q96PC2 410 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 XKR8Q9H6D3 395 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 GLOD4Q9HC38 313 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 SYTL2Q9HCH5 934 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 MRPL47Q9HD33 250 aaKnown RBP10□□□□□ -0.81
SF3B3-204ENST00000563739 AGPAT4Q9NRZ5 378 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 SPHK1Q9NYA1 384 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 UBP1Q9NZI7 540 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 FAM8A1Q9UBU6 413 aa10□□□□□ -0.81
SF3B3-204ENST00000563739 ICKQ9UPZ9 632 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms