RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 AGAP7PQ5VUJ5 663 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 GTF2H2CQ6P1K8 395 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 EPHX4Q8IUS5 362 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 TBC1D21Q8IYX1 336 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 PYCR2Q96C36 320 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 C1orf74Q96LT6 269 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 NSMCE3Q96MG7 304 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 EXOSC4Q9NPD3 245 aaKnown RBP10.29□□□□□ -0.76
RNF40-204ENST00000563683 IMPAD1Q9NX62 359 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ACTR3BQ9P1U1 418 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ZNF229Q9UJW7 825 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 GJD2Q9UKL4 321 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 A0A1W2PQ67 120 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 PPP6CO00743 305 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 PRAMEF11O60813 436 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 ESR1P03372 595 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 GKP32189 559 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 PTGER3P43115 390 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 RPIAP49247 311 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 HNRNPFP52597 415 aaKnown RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 CACNG1Q06432 222 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 CLPPQ16740 277 aaPredicted RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 HIST2H2ACQ16777 129 aaPredicted RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 PHKG1Q16816 387 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 FAM174BQ3ZCQ3 159 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 HIST2H2AA3Q6FI13 130 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 LCN8Q6JVE9 175 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 NEK10Q6ZWH5 1172 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 UBE2R2Q712K3 238 aaPredicted RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 C11orf74Q86VG3 221 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 FAM9CQ8IZT9 166 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 C8orf59Q8N0T1 100 aaPredicted RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 ABHD11Q8NFV4 315 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 NT5C3BQ969T7 300 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 SH3YL1Q96HL8 342 aaPredicted RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 CHID1Q9BWS9 393 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 MRM3Q9HC36 420 aaKnown RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 KERAO60938 352 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 GJB3O75712 270 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 EFNA1P20827 205 aaPredicted RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 SERPINB10P48595 397 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 POLR2LP62875 67 aaKnown RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 KCNJ8Q15842 424 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 UNC50Q53HI1 259 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 TMEM151AQ8N4L1 468 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 UTP15Q8TED0 518 aaKnown RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 MYRFLQ96LU7 910 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 DACH2Q96NX9 599 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 PANX1Q96RD7 426 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 BBS2Q9BXC9 721 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 SCN1AP35498 2009 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 HAS3O00219 553 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 RFXANKO14593 260 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 ABCB7O75027 752 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 SBK3P0C264 359 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 UMPSP11172 480 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 HSD17B1P14061 328 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 NR4A1P22736 598 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 SH3BP2P78314 561 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 PERM1Q5SV97 790 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 ZCCHC8Q6NZY4 707 aaKnown RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 CERS6Q6ZMG9 384 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 ISCA2Q86U28 154 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 TRAPPC5Q8IUR0 188 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 ADHFE1Q8IWW8 467 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 LRTM1Q9HBL6 345 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 SPG21Q9NZD8 308 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 SNX6Q9UNH7 406 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 SNX8Q9Y5X2 465 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 PAPSS2O95340 614 aaPredicted RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 CYP4B1P13584 511 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 AQP1P29972 269 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 CSKP41240 450 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 CYBRD1Q53TN4 286 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 RAB41Q5JT25 222 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 RBM48Q5RL73 367 aaKnown RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 C8orf82Q6P1X6 216 aaPredicted RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 ZNF549Q6P9A3 640 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 C17orf99Q6UX52 265 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 CMTR2Q8IYT2 770 aaKnown RBP10.28□□□□□ -0.76
RNF40-204ENST00000563683 SMIM14Q96QK8 99 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 CTRCQ99895 268 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 TPK1Q9H3S4 243 aa10.28□□□□□ -0.76
RNF40-204ENST00000563683 OR2AG2A6NM03 316 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 FFAR2O15552 330 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 INHAP05111 366 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 HSMCR30P0CW71 290 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 PTPN2P17706 415 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 CHI3L1P36222 383 aaPredicted RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 OPRL1P41146 370 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 MTHFRP42898 656 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 ALDH9A1P49189 494 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 XKR6Q5GH73 641 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 TTC23Q5W5X9 447 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 KCTD11Q693B1 232 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 DNAJB7Q7Z6W7 309 aaPredicted RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 CADM3Q8N126 398 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 OTULINQ96BN8 352 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 RERGLQ9H628 205 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 NSUN3Q9H649 340 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms