RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 CYP2F1P24903 491 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 CDC25CP30307 473 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ADORA1P30542 326 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 CDAP32320 146 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PCGF2P35227 344 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 RDXP35241 583 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GNL1P36915 607 aaPredicted RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ARHGAP25P42331 645 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GZMKP49863 264 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 CARD18P57730 90 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 B4GALNT1Q00973 533 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SPIBQ01892 262 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PDE7AQ13946 482 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GIT2Q14161 759 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PFKFB3Q16875 520 aaPredicted RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 FILIP1LQ4L180 1135 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TCTE1Q5JU00 501 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 LDLRAP1Q5SW96 308 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ANXA8L1Q5VT79 327 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ACSM6Q6P461 480 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ZBTB49Q6ZSB9 765 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SEPT14Q6ZU15 432 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PRSS42Q7Z5A4 293 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ERO1BQ86YB8 467 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GHDCQ8N2G8 530 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 DNAAF1Q8NEP3 725 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 OR2T3Q8NH03 318 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 CAGE1Q8TC20 777 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SYN2Q92777 582 aaPredicted RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GCDHQ92947 438 aaPredicted RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TSPAN17Q96FV3 270 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PRMT6Q96LA8 375 aaPredicted RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 PANX3Q96QZ0 392 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 RHOXF2Q9BQY4 288 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 VN1R3Q9BXE9 311 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 C1QTNF5Q9BXJ0 243 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TMEM168Q9H0V1 697 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 GLT8D2Q9H1C3 349 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SLCO5A1Q9H2Y9 848 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 MMP27Q9H306 513 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 RNPEPL1Q9HAU8 725 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 KCNN3Q9UGI6 736 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SERTAD3Q9UJW9 196 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 CNOT11Q9UKZ1 510 aaKnown RBP5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 VPS4AQ9UN37 437 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SNX7Q9UNH6 387 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 TNNQ9UQP3 1299 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC30A1Q9Y6M5 507 aa5.13□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF541Q9H0D2 1346 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF532Q9HCE3 1301 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 ANKRD31Q8N7Z5 1873 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 TCP10L2B9ZVM9 353 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 NPIPB11E5RHQ5 1161 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 HRKO00198 91 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 DNALI1O14645 258 aaPredicted RBP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CLDN3O15551 220 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 PJA2O43164 708 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 SPOPO43791 374 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 HBP1O60381 514 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CRCPO75575 148 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 ADAP00813 363 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 KRT8P05787 483 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CHRM2P08172 466 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CETPP11597 493 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 PCNAP12004 261 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 SFPQP23246 707 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 AKT2P31751 481 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 MTTPP55157 894 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 HUNKP57058 714 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 E2F2Q14209 437 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 SQLEQ14534 574 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 LPIN1Q14693 890 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 VEPH1Q14D04 833 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 RCN1Q15293 331 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 ALX1Q15699 326 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CERKLQ49MI3 558 aaPredicted RBP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 SBK1Q52WX2 424 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 TIGD5Q53EQ6 642 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 KLHL26Q53HC5 615 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF789Q5FWF6 425 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 FBXO48Q5FWF7 155 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 HIST2H2BCQ6DN03 193 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 HIST2H2BDQ6DRA6 164 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 APOBEC3HQ6NTF7 200 aaKnown RBP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 RGMBQ6NW40 437 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CDC42EP5Q6NZY7 148 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 MIS18BP1Q6P0N0 1132 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 PAPD4Q6PIY7 484 aaKnown RBP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CWC27Q6UX04 472 aaKnown RBP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 TMEM179Q6ZVK1 233 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 LDB1Q86U70 411 aaPredicted RBP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CAMK1DQ8IU85 385 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 FBXO39Q8N4B4 442 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 GBP7Q8N8V2 638 aaPredicted RBP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 RASGEF1AQ8N9B8 481 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 TMEM185AQ8NFB2 350 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 POC1BQ8TC44 478 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 CKAP2Q8WWK9 683 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 NSMAFQ92636 917 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 NAP1L3Q99457 506 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms