RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 FAM198BQ6UWH4 519 aa16.09■□□□□ 0.17
CMTM3-205ENST00000562707 HOOK3Q86VS8 718 aa16.09■□□□□ 0.17
CMTM3-205ENST00000562707 GPR135Q8IZ08 494 aa16.09■□□□□ 0.17
CMTM3-205ENST00000562707 LILRA3Q8N6C8 439 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-205ENST00000562707 N4BP2L2Q92802 583 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-205ENST00000562707 RBM41Q96IZ5 413 aaKnown RBP16.09■□□□□ 0.17
CMTM3-205ENST00000562707 IP6K3Q96PC2 410 aa16.09■□□□□ 0.17
CMTM3-205ENST00000562707 QKIQ96PU8 341 aaKnown RBP eCLIP16.09■□□□□ 0.17
CMTM3-205ENST00000562707 COPS8Q99627 209 aa16.09■□□□□ 0.17
CMTM3-205ENST00000562707 C17orf62Q9BQA9 187 aa16.09■□□□□ 0.17
CMTM3-205ENST00000562707 FERMT1Q9BQL6 677 aa16.09■□□□□ 0.17
CMTM3-205ENST00000562707 DHRS4Q9BTZ2 278 aa16.09■□□□□ 0.17
CMTM3-205ENST00000562707 NHEJ1Q9H9Q4 299 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-205ENST00000562707 ZNF106Q9H2Y7 1883 aaKnown RBP16.09■□□□□ 0.17
CMTM3-205ENST00000562707 C2orf74A8MZ97 194 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 BTN3A3O00478 584 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 BTN3A1O00481 513 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 ZNF749O43361 778 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 SGTAO43765 313 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 KLHL41O60662 606 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 CRTAMO95727 393 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 ATP1B2P14415 290 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-205ENST00000562707 OTX2P32243 289 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 PRLHRP49683 370 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 TCEAL1Q15170 157 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 ZNF789Q5FWF6 425 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 VWA5B1Q5TIE3 1220 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 MAMDC2Q7Z304 686 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-205ENST00000562707 CCDC50Q8IVM0 306 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 RCOR2Q8IZ40 523 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 IQCKQ8N0W5 287 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 FER1L6-AS2Q96M78 137 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 TRAPPC9Q96Q05 1148 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 PITPNM3Q9BZ71 974 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 GBA3Q9H227 469 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 TFB2MQ9H5Q4 396 aaKnown RBP16.08■□□□□ 0.16
CMTM3-205ENST00000562707 MVB12BQ9H7P6 319 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 GPN3Q9UHW5 284 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-205ENST00000562707 INTUQ9ULD6 942 aa16.08■□□□□ 0.16
CMTM3-205ENST00000562707 AAR2Q9Y312 384 aaKnown RBP16.08■□□□□ 0.16
CMTM3-205ENST00000562707 NOTCH2Q04721 2471 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 SPTAN1Q13813 2472 aaKnown RBP16.07■□□□□ 0.16
CMTM3-205ENST00000562707 hCG_1818297A0A087WSY0 165 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 AGAP14A8MT82 685 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 H7C0C1 242 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 PEX12O00623 359 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 CBFA2T2O43439 604 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 KRT86O43790 486 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 IGHEP01854 428 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 ALPPP05187 535 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 ITGALP20701 1170 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 HADHAP40939 763 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 ATP5OP48047 213 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 CD151P48509 253 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 XIAPP98170 497 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 PRPSAP1Q14558 356 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 NR6A1Q15406 480 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 PLEKHN1Q494U1 663 aaPredicted RBP16.07■□□□□ 0.16
CMTM3-205ENST00000562707 CCDC181Q5TID7 509 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 MLIPQ5VWP3 458 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 RANBP10Q6VN20 620 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 AMIGO1Q86WK6 493 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 NXPE1Q8N323 547 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 CLEC1AQ8NC01 280 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 PHC3Q8NDX5 983 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 OR52E1Q8NGJ3 308 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 SNRNP40Q96DI7 357 aaKnown RBP16.07■□□□□ 0.16
CMTM3-205ENST00000562707 APOL2Q9BQE5 337 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 KLHL25Q9H0H3 589 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 FAM96AQ9H5X1 160 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 COG4Q9H9E3 785 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 VPS37BQ9H9H4 285 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 ABHD10Q9NUJ1 306 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 ALG6Q9Y672 507 aa16.07■□□□□ 0.16
CMTM3-205ENST00000562707 SPENQ96T58 3664 aaKnown RBP16.06■□□□□ 0.16
CMTM3-205ENST00000562707 ENO4A6NNW6 628 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 LDB2O43679 373 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 CD63P08962 238 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 PVRP15151 417 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 RBL1P28749 1068 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 TMPRSS15P98073 1019 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 ELOAQ14241 798 aaKnown RBP16.06■□□□□ 0.16
CMTM3-205ENST00000562707 SSPNQ14714 243 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 GPR33Q49SQ1 333 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 LYPLAL1Q5VWZ2 237 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 CDHR3Q6ZTQ4 885 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 SNX20Q7Z614 316 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 KATNAL2Q8IYT4 538 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 CISD2Q8N5K1 135 aaKnown RBP16.06■□□□□ 0.16
CMTM3-205ENST00000562707 OR13C4Q8NGS5 318 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 C19orf60Q96EN9 201 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 OR52A5Q9H2C5 316 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 ACTR10Q9NZ32 417 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 B3GNT3Q9Y2A9 372 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.06■□□□□ 0.16
CMTM3-205ENST00000562707 AP1M2Q9Y6Q5 423 aa16.06■□□□□ 0.16
CMTM3-205ENST00000562707 UTP20O75691 2785 aaKnown RBP16.06■□□□□ 0.16
CMTM3-205ENST00000562707 IPO13O94829 963 aaKnown RBP16.05■□□□□ 0.16
CMTM3-205ENST00000562707 ADRA1AP35348 466 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 RPA4Q13156 261 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms