RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 DMGDHQ9UI17 866 aaKnown RBP16.3■□□□□ 0.2
CLK3-207ENST00000562389 SLC24A2Q9UI40 661 aa16.3■□□□□ 0.2
CLK3-207ENST00000562389 E5RI56 91 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 HAUS5O94927 633 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 AMD1P17707 334 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 CARSP49589 748 aaKnown RBP16.29■□□□□ 0.2
CLK3-207ENST00000562389 PPM1FP49593 454 aaPredicted RBP16.29■□□□□ 0.2
CLK3-207ENST00000562389 CSE1LP55060 971 aaKnown RBP16.29■□□□□ 0.2
CLK3-207ENST00000562389 KRT33BQ14525 404 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 GBX1Q14549 363 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 PLCL1Q15111 1095 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 TEDDM1Q5T9Z0 273 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 ZNF549Q6P9A3 640 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 CNSTQ6PJW8 725 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 PLXDC1Q8IUK5 500 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 VRK3Q8IV63 474 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 ACVR1CQ8NER5 493 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 WDR36Q8NI36 951 aaKnown RBP16.29■□□□□ 0.2
CLK3-207ENST00000562389 NCSTNQ92542 709 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 RSC1A1Q92681 617 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 KCNJ9Q92806 393 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 CCDC74BQ96LY2 380 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 FERD3LQ96RJ6 166 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 RAB33BQ9H082 229 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 TMEM9Q9P0T7 183 aa16.29■□□□□ 0.2
CLK3-207ENST00000562389 C1QTNF9BB2RNN3 333 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 HGSO14964 777 aaPredicted RBP16.28■□□□□ 0.2
CLK3-207ENST00000562389 ZNF500O60304 480 aaPredicted RBP16.28■□□□□ 0.2
CLK3-207ENST00000562389 C9P02748 559 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 C1QTNF9P0C862 333 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 TYRP1P17643 537 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 CHRM3P20309 590 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 GABRB3P28472 473 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 ATP5DP30049 168 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 LSSP48449 732 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 MGAT5Q09328 741 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 PHF19Q5T6S3 580 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 KLHL35Q6PF15 583 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 PALM2Q8IXS6 379 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 TBC1D21Q8IYX1 336 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 OR5K2Q8NHB8 316 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 JPH3Q8WXH2 748 aaPredicted RBP16.28■□□□□ 0.2
CLK3-207ENST00000562389 AARSD1Q9BTE6 412 aaKnown RBP16.28■□□□□ 0.2
CLK3-207ENST00000562389 TRIT1Q9H3H1 467 aaKnown RBP16.28■□□□□ 0.2
CLK3-207ENST00000562389 L2HGDHQ9H9P8 463 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 POLR1BQ9H9Y6 1135 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 KLHL42Q9P2K6 505 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 DKK4Q9UBT3 224 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 EPHA6Q9UF33 1036 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 SATB2Q9UPW6 733 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 ASF1AQ9Y294 204 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 MED16Q9Y2X0 877 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 PCDHGA8Q9Y5G5 932 aa16.28■□□□□ 0.2
CLK3-207ENST00000562389 A0A1W2PNU3 283 aaPredicted RBP16.27■□□□□ 0.2
CLK3-207ENST00000562389 TMEM8BA6NDV4 472 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 AHSGP02765 367 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 GSTA2P09210 222 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 CLCN7P51798 805 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 GABREP78334 506 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 C3orf38Q5JPI3 329 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 IGF2-ASQ6U949 168 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 UNC5DQ6UXZ4 953 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 CYS1Q717R9 158 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 CCDC25Q86WR0 208 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 ZBTB2Q8N680 514 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 PHC3Q8NDX5 983 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 OR52E1Q8NGJ3 308 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 OR5AR1Q8NGP9 310 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 HGH1Q9BTY7 390 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 TFB2MQ9H5Q4 396 aaKnown RBP16.27■□□□□ 0.2
CLK3-207ENST00000562389 ZFATQ9P243 1243 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 SLC17A6Q9P2U8 582 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 GALPQ9UBC7 116 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 POLG2Q9UHN1 485 aa16.27■□□□□ 0.2
CLK3-207ENST00000562389 CORO1CQ9ULV4 474 aaPredicted RBP16.27■□□□□ 0.2
CLK3-207ENST00000562389 OR5K3A6NET4 321 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 PLD2O14939 933 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 CAPN5O15484 640 aaPredicted RBP16.26■□□□□ 0.19
CLK3-207ENST00000562389 DXOO77932 396 aaKnown RBP16.26■□□□□ 0.19
CLK3-207ENST00000562389 CAPNS1P04632 268 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 RPN2P04844 631 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 MPOP05164 745 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 ANKRD34CP0C6C1 535 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 MPSTP25325 297 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 SSTR1P30872 391 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 MAGEA4P43358 317 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 GFERP55789 205 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 C16orf72Q14CZ0 275 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 TTLL9Q3SXZ7 439 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 CEP128Q6ZU80 1094 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 RAB11FIP2Q7L804 512 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 ARHGAP22Q7Z5H3 698 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 SLC26A11Q86WA9 606 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 OOSP2Q86WS3 158 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 RCBTB1Q8NDN9 531 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 GIMAP7Q8NHV1 300 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 LCN9Q8WX39 176 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 FAM136AQ96C01 138 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 ZDHHC12Q96GR4 267 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 PRR11Q96HE9 360 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms