RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 HDAC3O15379 428 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 SIX3O95343 332 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-205ENST00000562310 HTR1BP28222 390 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 PREPP48147 710 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 RPIAP49247 311 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 CLCQ05315 142 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 SF3A3Q12874 501 aaKnown RBP eCLIP13.97□□□□□ -0.17
COMMD4-205ENST00000562310 NFATC4Q14934 902 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 SH2D4BQ5SQS7 431 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 C6orf89Q6UWU4 347 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 UNC5DQ6UXZ4 953 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 EFL1Q7Z2Z2 1120 aaKnown RBP13.97□□□□□ -0.17
COMMD4-205ENST00000562310 GALNT13Q8IUC8 556 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 CFAP206Q8IYR0 622 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 CHCHD4Q8N4Q1 142 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 GBP7Q8N8V2 638 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-205ENST00000562310 OR56A4Q8NGH8 313 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 FAM174AQ8TBP5 190 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 ATL1Q8WXF7 558 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 DLG3Q92796 817 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 RHBDF1Q96CC6 855 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 TOE1Q96GM8 510 aaKnown RBP13.97□□□□□ -0.17
COMMD4-205ENST00000562310 SCARF2Q96GP6 870 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-205ENST00000562310 KCNK13Q9HB14 408 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 FZD3Q9NPG1 666 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 ARL15Q9NXU5 204 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 WSB2Q9NYS7 404 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-205ENST00000562310 FAM8A1Q9UBU6 413 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 EIF2B4Q9UI10 523 aaKnown RBP13.97□□□□□ -0.17
COMMD4-205ENST00000562310 HS3ST3A1Q9Y663 406 aa13.97□□□□□ -0.17
COMMD4-205ENST00000562310 CCT8L1PA6NM43 557 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 MATN2O00339 956 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 E2F3O00716 465 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 KIAA0754O94854 1291 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 RPN2P04844 631 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 GGT5P36269 586 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 CCR10P46092 362 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 AGTR2P50052 363 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 PKNOX1P55347 436 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 CDC16Q13042 620 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 PLA2G4EQ3MJ16 856 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 FOXR1Q6PIV2 292 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 ATG14Q6ZNE5 492 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 LRRC70Q7Z2Q7 622 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 TRPM8Q7Z2W7 1104 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 PDZD3Q86UT5 571 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 MAGEC3Q8TD91 643 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 FBXL8Q96CD0 374 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 RMDN2Q96LZ7 410 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 WDR92Q96MX6 357 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 ZNF382Q96SR6 550 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 CD244Q9BZW8 370 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 OPTCQ9UBM4 332 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 GULP1Q9UBP9 304 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 ZNHIT2Q9UHR6 403 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 MUTYHQ9UIF7 546 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 ACSL5Q9ULC5 683 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 SIT1Q9Y3P8 196 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 XIRP2A4UGR9 3374 aa13.96□□□□□ -0.17
COMMD4-205ENST00000562310 SPTBN5Q9NRC6 3674 aaKnown RBP13.95□□□□□ -0.18
COMMD4-205ENST00000562310 IGHV1OR15-9A0A0B4J2B8 117 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 ARHGEF33A8MVX0 844 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 TNFRSF10CO14798 259 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 FSBPO95073 299 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 GUCA1CO95843 209 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 IGHV4-34P06331 123 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 CEACAM5P06731 702 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 FGF4P08620 206 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 RABIFP47224 123 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 PFN3P60673 137 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 ABRQ12979 859 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 IFT88Q13099 833 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 NFE2L1Q14494 772 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 RBBP7Q16576 425 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 SPDYAQ5MJ70 313 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 GCNT7Q6ZNI0 430 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 YTHDF3Q7Z739 585 aaKnown RBP13.95□□□□□ -0.18
COMMD4-205ENST00000562310 TMEM145Q8NBT3 493 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 AGAP11Q8TF27 550 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 SPACA7Q96KW9 195 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 CCDC138Q96M89 665 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 LRRC37BQ96QE4 947 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 OR2M4Q96R27 311 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 MYOCQ99972 504 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 TMEM79Q9BSE2 394 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 HGH1Q9BTY7 390 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
COMMD4-205ENST00000562310 OR52A5Q9H2C5 316 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 C6orf106Q9H6K1 298 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-205ENST00000562310 MID1IP1Q9NPA3 183 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 PFDN4Q9NQP4 134 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 ACSS2Q9NR19 701 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 C2orf42Q9NWW7 574 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 ZDHHC2Q9UIJ5 367 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 ANGPTL3Q9Y5C1 460 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 LRP4O75096 1905 aa13.95□□□□□ -0.18
COMMD4-205ENST00000562310 PRSS38A1L453 326 aa13.94□□□□□ -0.18
COMMD4-205ENST00000562310 POM121BA6NF01 834 aa13.94□□□□□ -0.18
COMMD4-205ENST00000562310 LRRC14BA6NHZ5 514 aa13.94□□□□□ -0.18
COMMD4-205ENST00000562310 K7EPI3 171 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms