RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HYAL3O43820 417 aaPredicted RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 CPNE6O95741 557 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 TOP3BO95985 862 aaKnown RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 MT-CO3P00414 261 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 RHOXF2BP0C7M4 288 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 TPBGLP0DKB5 382 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 CBSLP0DN79 551 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 STX2P32856 288 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 CBSP35520 551 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 CAPZBP47756 277 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 CSRP3P50461 194 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 CSE1LP55060 971 aaKnown RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 FOXK2Q01167 660 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 GRB7Q14451 532 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 TMED2Q15363 201 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 KIF26BQ2KJY2 2108 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 RBM20Q5T481 1227 aaKnown RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 DUS1LQ6P1R4 473 aaKnown RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 ZNF574Q6ZN55 896 aaPredicted RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 RBM44Q6ZP01 1051 aaKnown RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 OTOAQ7RTW8 1153 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 PALM2Q8IXS6 379 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 TBC1D21Q8IYX1 336 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 FBXO15Q8NCQ5 510 aaPredicted RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 ACVR1CQ8NER5 493 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 OR4D9Q8NGE8 314 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 TFGQ92734 400 aaPredicted RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 CXorf40BQ96DE9 158 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 LIN37Q96GY3 246 aaPredicted RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 SLC38A3Q99624 504 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 RHOXF2Q9BQY4 288 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 CDC42EP4Q9H3Q1 356 aaKnown RBP13.08□□□□□ -0.32
CDH1-204ENST00000562118 RHOJQ9H4E5 214 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 ACSS3Q9H6R3 686 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 KCNK4Q9NYG8 393 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 CLCA2Q9UQC9 943 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 MSRB2Q9Y3D2 182 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 ENTPD2Q9Y5L3 495 aa13.08□□□□□ -0.32
CDH1-204ENST00000562118 CHD8Q9HCK8 2581 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 TRBV23OR9-2A0A075B6M9 112 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
CDH1-204ENST00000562118 SLU7O95391 586 aaKnown RBP13.07□□□□□ -0.32
CDH1-204ENST00000562118 TSPAN12O95859 305 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 CAPNS1P04632 268 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 ABHD2P08910 425 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 MYBL2P10244 700 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 THRAP10827 490 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 ERGP11308 486 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 ENO3P13929 434 aaPredicted RBP13.07□□□□□ -0.32
CDH1-204ENST00000562118 ITGB6P18564 788 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 SKIV2L2P42285 1042 aaKnown RBP13.07□□□□□ -0.32
CDH1-204ENST00000562118 LIMK2P53671 638 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 CDKN2DP55273 166 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 HSPA14Q0VDF9 509 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 SPIDRQ14159 915 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 ISXQ2M1V0 245 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 KBTBD12Q3ZCT8 623 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 SYTL3Q4VX76 610 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 FAM45BPQ6NSW5 357 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 IGF2-ASQ6U949 168 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 NAPRTQ6XQN6 538 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 CYHR1Q6ZMK1 362 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 CCDC25Q86WR0 208 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 TRIM48Q8IWZ4 208 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 ZBTB2Q8N680 514 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 FAM45AQ8TCE6 357 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 FBF1Q8TES7 1133 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 IFT81Q8WYA0 676 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 DEPDC7Q96QD5 511 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 GFM1Q96RP9 751 aaKnown RBP13.07□□□□□ -0.32
CDH1-204ENST00000562118 GPR22Q99680 433 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 CPNE1Q99829 537 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 NUDT22Q9BRQ3 303 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 SCNM1Q9BWG6 230 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 TBC1D10AQ9BXI6 508 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 IMP3Q9NV31 184 aaKnown RBP13.07□□□□□ -0.32
CDH1-204ENST00000562118 KLK13Q9UKR3 277 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 CFAP20Q9Y6A4 193 aaKnown RBP13.07□□□□□ -0.32
CDH1-204ENST00000562118 COLEC10Q9Y6Z7 277 aa13.07□□□□□ -0.32
CDH1-204ENST00000562118 SNRNP200O75643 2136 aaKnown RBP13.07□□□□□ -0.32
CDH1-204ENST00000562118 DMXL2Q8TDJ6 3036 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 A0A1W2PNU3 283 aaPredicted RBP13.06□□□□□ -0.32
CDH1-204ENST00000562118 DUX1O43812 170 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 PSIP1O75475 530 aaKnown RBP13.06□□□□□ -0.32
CDH1-204ENST00000562118 UBXN7O94888 489 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 ANKRD34CP0C6C1 535 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 MPC1LP0DKB6 136 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 GP5P40197 560 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 MAPK9P45984 424 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 CLDN6P56747 220 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 FOXC1Q12948 553 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 TRA2AQ13595 282 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDH1-204ENST00000562118 SLMAPQ14BN4 828 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 ZKSCAN8Q15776 578 aaPredicted RBP13.06□□□□□ -0.32
CDH1-204ENST00000562118 KYNUQ16719 465 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 ACSBG2Q5FVE4 666 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 HECTD2Q5U5R9 776 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 WDR93Q6P2C0 686 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms