RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 DTD2Q96FN9 168 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 HIST1H2AHQ96KK5 128 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 COQ10AQ96MF6 247 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 CDK15Q96Q40 435 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 ZNF184Q99676 751 aaPredicted RBP12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 HIST1H2AJQ99878 128 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 GDF15Q99988 308 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 GPATCH1Q9BRR8 931 aaKnown RBP12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 H2AFJQ9BTM1 129 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 MTG2Q9H4K7 406 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 EBF3Q9H4W6 596 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 SLC32A1Q9H598 525 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 EPHX3Q9H6B9 360 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 ARL15Q9NXU5 204 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 ASIC5Q9NY37 505 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 ABCD2Q9UBJ2 740 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 PSMD13Q9UNM6 376 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 PDE10AQ9Y233 779 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 LRCH1Q9Y2L9 728 aa12.39□□□□□ -0.43
AC055717.2-201ENST00000561864 PRRT4C9JH25 899 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 GFYI3L273 518 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 IFRD1O00458 451 aaPredicted RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 LSM1O15116 133 aaKnown RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 PEX1O43933 1283 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 EEDO75530 441 aaKnown RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 STAMBPO95630 424 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 NPPAP01160 153 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 C8BP07358 591 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 GSTM1P09488 218 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 PCSK2P16519 638 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 SLC6A12P48065 614 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 SLC6A11P48066 632 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 PRLHRP49683 370 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 HTR6P50406 440 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 CCR3P51677 355 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 DIO3P55073 304 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 GSTM4Q03013 218 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 HSPA14Q0VDF9 509 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 BOP1Q14137 746 aaKnown RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 TRIM25Q14258 630 aaKnown RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 NR6A1Q15406 480 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 SHHQ15465 462 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 MAP7D1Q3KQU3 841 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 SYTL3Q4VX76 610 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 C9orf64Q5T6V5 341 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 IRAK1BP1Q5VVH5 260 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 PRR23BQ6ZRT6 265 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 Q6ZSR9 355 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 DSG4Q86SJ6 1040 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 RETREG3Q86VR2 466 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 SFRP1Q8N474 314 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 SNX31Q8N9S9 440 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 TERB1Q8NA31 727 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 FNDC5Q8NAU1 212 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 HIPK4Q8NE63 616 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 BHLHE22Q8NFJ8 381 aaPredicted RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 AP2M1Q96CW1 435 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 ZCCHC2Q9C0B9 1178 aaKnown RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 TMEM245Q9H330 911 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 SLC52A3Q9NQ40 469 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 HPS4Q9NQG7 708 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 CD300AQ9UGN4 299 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 LEF1Q9UJU2 399 aaPredicted RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 CDH7Q9ULB5 785 aa12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 TNRC18O15417 2968 aaPredicted RBP12.38□□□□□ -0.43
AC055717.2-201ENST00000561864 C15orf38-AP3S2A0A0A6YYH1 394 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 C1QTNF3-AMACRE9PGA6 284 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 MANBAO00462 879 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 AREL1O15033 823 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 SPINT1O43278 529 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 ATG13O75143 517 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 SLCO2B1O94956 709 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 CLDN9O95484 217 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 KRT6AP02538 564 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 KRT6BP04259 564 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 EIF2DP41214 584 aaKnown RBP12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 KRT6CP48668 564 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 SLC7A2P52569 658 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 NME5P56597 212 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 MS4A2Q01362 244 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 CREB5Q02930 508 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 FCHO2Q0JRZ9 810 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 ABRAXAS2Q15018 415 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 RAB30Q15771 203 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 VPS26BQ4G0F5 336 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 TMEM52BQ4KMG9 183 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 BCL7AQ4VC05 210 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 SCIMPQ6UWF3 145 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 SERPINA13PQ6UXR4 307 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 TMEM184AQ6ZMB5 413 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 TRIM46Q7Z4K8 759 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 ARPINQ7Z6K5 226 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 ZFAND4Q86XD8 727 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 KLHDC8AQ8IYD2 350 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 PQLC1Q8N2U9 271 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 ZNF366Q8N895 744 aa12.37□□□□□ -0.43
AC055717.2-201ENST00000561864 CATSPER1Q8NEC5 780 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms