RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PGRMC1O00264 195 aaKnown RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 PFDN6O15212 129 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 TCP1P17987 556 aaKnown RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 RPL22P35268 128 aaKnown RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 POLE2P56282 527 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 BASP1P80723 227 aaKnown RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 KCTD19Q17RG1 926 aaPredicted RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 PWWP2BQ6NUJ5 590 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 BORAQ6PGQ7 559 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 PPP1R3BQ86XI6 285 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 REXO1L1PQ8IX06 675 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 RASGEF1CQ8N431 466 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 SIDT2Q8NBJ9 832 aaKnown RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 PPHLN1Q8NEY8 458 aaKnown RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 ZFPM2Q8WW38 1151 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 ZNF778Q96MU6 729 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 RUFY1Q96T51 708 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 CD180Q99467 661 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 GEMIN8Q9NWZ8 242 aaKnown RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 TRMT1Q9NXH9 659 aaKnown RBP15.53■□□□□ 0.08
LMX1B-204ENST00000561065 POMT2Q9UKY4 750 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 HEBP2Q9Y5Z4 205 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 COLEC10Q9Y6Z7 277 aa15.53■□□□□ 0.08
LMX1B-204ENST00000561065 J3QKU1 62 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 SLC28A2O43868 658 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 AP2A2O94973 939 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 POLR2CP19387 275 aaPredicted RBP15.52■□□□□ 0.08
LMX1B-204ENST00000561065 DLSTP36957 453 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 PRAMEP78395 509 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 KRT33BQ14525 404 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 GSE1Q14687 1217 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 AARS2Q5JTZ9 985 aaKnown RBP15.52■□□□□ 0.08
LMX1B-204ENST00000561065 PCID2Q5JVF3 399 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 C6orf15Q6UXA7 325 aaPredicted RBP15.52■□□□□ 0.08
LMX1B-204ENST00000561065 D2HGDHQ8N465 521 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 ACTRT1Q8TDG2 376 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 STAMBPL1Q96FJ0 436 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 TSSK1BQ9BXA7 367 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 IL22Q9GZX6 179 aa15.52■□□□□ 0.08
LMX1B-204ENST00000561065 AKIRIN1Q9H9L7 192 aaPredicted RBP15.52■□□□□ 0.08
LMX1B-204ENST00000561065 MYO18BQ8IUG5 2567 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 MAGEB16A2A368 324 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 BTN3A3O00478 584 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 FURINP09958 794 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 ZSCAN5DPP0CG00 497 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 NDUFS1P28331 727 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 NSG1P42857 185 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 PLOD1Q02809 727 aaPredicted RBP15.51■□□□□ 0.07
LMX1B-204ENST00000561065 SEMA3AQ14563 771 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 ITIH4Q14624 930 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 GPR19Q15760 415 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 PACS1Q6VY07 963 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 NAPRTQ6XQN6 538 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 ZNF534Q76KX8 674 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 KMT5CQ86Y97 462 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 SLC35F6Q8N357 371 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 ACVR1CQ8NER5 493 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 OR4E2Q8NGC2 313 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 OR52E1Q8NGJ3 308 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 OR6P1Q8NGX9 317 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 CT55Q8WUE5 264 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 PDLIM2Q96JY6 352 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 HGH1Q9BTY7 390 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 TRIM4Q9C037 500 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 CASS4Q9NQ75 786 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 FGF21Q9NSA1 209 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 SMARCAL1Q9NZC9 954 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 RARRES3Q9UL19 164 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 BTRCQ9Y297 605 aa15.51■□□□□ 0.07
LMX1B-204ENST00000561065 ASH1LQ9NR48 2969 aaKnown RBP15.51■□□□□ 0.07
LMX1B-204ENST00000561065 UBA6A0AVT1 1052 aaPredicted RBP15.5■□□□□ 0.07
LMX1B-204ENST00000561065 BTN3A1O00481 513 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 OR1I1O60431 355 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 KCNJ1P48048 391 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 HSD11B2P80365 405 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 ACVR1Q04771 509 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 KCNAB2Q13303 367 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 BOP1Q14137 746 aaKnown RBP15.5■□□□□ 0.07
LMX1B-204ENST00000561065 FASTKD1Q53R41 847 aaKnown RBP15.5■□□□□ 0.07
LMX1B-204ENST00000561065 TSTD2Q5T7W7 516 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 C16orf46Q6P387 395 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 CYB5D1Q6P9G0 228 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 AFTPHQ6ULP2 937 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 PRICKLE2Q7Z3G6 844 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 TMEM135Q86UB9 458 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 PRELID2Q8N945 189 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 PHC3Q8NDX5 983 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 LKAAEAR1Q8TD35 194 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 ZNF501Q96CX3 271 aaPredicted RBP15.5■□□□□ 0.07
LMX1B-204ENST00000561065 SGSM3Q96HU1 749 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 CATSPER2Q96P56 530 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 FERD3LQ96RJ6 166 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 OSBPL9Q96SU4 736 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 EFHD1Q9BUP0 239 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 SLC25A18Q9H1K4 315 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 ADNPQ9H2P0 1102 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 PDE7BQ9NP56 450 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 LHX9Q9NQ69 397 aa15.5■□□□□ 0.07
LMX1B-204ENST00000561065 SNX12Q9UMY4 172 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms