RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 STSP08842 583 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 FAM228BP0C875 321 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 GRNP28799 593 aaKnown RBP17.95■□□□□ 0.46
TPM1-226ENST00000560959 TNNT3P45378 269 aaPredicted RBP17.95■□□□□ 0.46
TPM1-226ENST00000560959 LMAN1P49257 510 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 DCDP81605 110 aaKnown RBP17.95■□□□□ 0.46
TPM1-226ENST00000560959 CDHR3Q6ZTQ4 885 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 GLT6D1Q7Z4J2 308 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 CPNE8Q86YQ8 564 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 MCEMP1Q8IX19 187 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.95■□□□□ 0.46
TPM1-226ENST00000560959 FAR1Q8WVX9 515 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 RMDN2Q96LZ7 410 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 AP1M1Q9BXS5 423 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 MAK16Q9BXY0 300 aaKnown RBP17.95■□□□□ 0.46
TPM1-226ENST00000560959 ZBTB20Q9HC78 741 aaPredicted RBP17.95■□□□□ 0.46
TPM1-226ENST00000560959 UBP1Q9NZI7 540 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 OSGIN2Q9Y236 505 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 A0A1B0GTH6 734 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 A0A1W2PQJ5 194 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 C2orf74A8MZ97 194 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 AGPSO00116 658 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 BTN3A3O00478 584 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 E2F3O00716 465 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 GPR39O43194 453 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 CBSLP0DN79 551 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 PTPN3P26045 913 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 AKT1P31749 480 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 CBSP35520 551 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 WNT3AP56704 352 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 ANO6Q4KMQ2 910 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 SIRPB2Q5JXA9 342 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 B3GNTL1Q67FW5 361 aaPredicted RBP17.94■□□□□ 0.46
TPM1-226ENST00000560959 FCRL6Q6DN72 434 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 MRPL14Q6P1L8 145 aaKnown RBP17.94■□□□□ 0.46
TPM1-226ENST00000560959 KDELC1Q6UW63 502 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 CFAP206Q8IYR0 622 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.94■□□□□ 0.46
TPM1-226ENST00000560959 GBP5Q96PP8 586 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 NAT10Q9H0A0 1025 aaKnown RBP17.94■□□□□ 0.46
TPM1-226ENST00000560959 CTTNBP2NLQ9P2B4 639 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 IFT80Q9P2H3 777 aaPredicted RBP17.94■□□□□ 0.46
TPM1-226ENST00000560959 NDOR1Q9UHB4 597 aa17.94■□□□□ 0.46
TPM1-226ENST00000560959 NOVA2Q9UNW9 492 aaKnown RBP17.94■□□□□ 0.46
TPM1-226ENST00000560959 DIDO1Q9BTC0 2240 aaKnown RBP17.93■□□□□ 0.46
TPM1-226ENST00000560959 C3orf70A6NLC5 250 aaPredicted RBP17.93■□□□□ 0.46
TPM1-226ENST00000560959 BTN3A1O00481 513 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 SGTAO43765 313 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 ZG16O60844 167 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 CD68P34810 354 aaPredicted RBP17.93■□□□□ 0.46
TPM1-226ENST00000560959 CD151P48509 253 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 NR2C2P49116 596 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 ART3Q13508 389 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 SLC1A5Q15758 541 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 CYP2A13Q16696 494 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 FAM182AQ5T1J6 154 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 BZW1Q7L1Q6 419 aaKnown RBP17.93■□□□□ 0.46
TPM1-226ENST00000560959 DET1Q7L5Y6 550 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 PPP1R32Q7Z5V6 425 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 HM13Q8TCT9 377 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 GRHL3Q8TE85 626 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 NAP1L5Q96NT1 182 aaPredicted RBP17.93■□□□□ 0.46
TPM1-226ENST00000560959 FERD3LQ96RJ6 166 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 BPIFA3Q9BQP9 254 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 MVB12BQ9H7P6 319 aa17.93■□□□□ 0.46
TPM1-226ENST00000560959 KLF2Q9Y5W3 355 aaPredicted RBP17.93■□□□□ 0.46
TPM1-226ENST00000560959 LRRD1A4D1F6 860 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 AGAP14A8MT82 685 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 PRSS44E7EML9 344 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 OR2B3O76000 313 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 POLBP06746 335 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 NR1I3Q14994 352 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 NOMO1Q15155 1222 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 NFKBIBQ15653 356 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 SARM1Q6SZW1 724 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 AMIGO1Q86WK6 493 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 DNAJB14Q8TBM8 379 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 BLOC1S5Q8TDH9 187 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 N4BP2L2Q92802 583 aaPredicted RBP17.92■□□□□ 0.46
TPM1-226ENST00000560959 RELTQ969Z4 430 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 MRGPRX2Q96LB1 330 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 COPG2Q9UBF2 871 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 CROCCQ5TZA2 2017 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 PDZD2O15018 2839 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 CSMD2Q7Z408 3487 aa17.92■□□□□ 0.46
TPM1-226ENST00000560959 CCDC66A2RUB6 948 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 SMTNL1A8MU46 457 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 STX7O15400 261 aaKnown RBP17.91■□□□□ 0.46
TPM1-226ENST00000560959 KRT38O76015 456 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 PRAMEF1O95521 474 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 UMODP07911 640 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 H2AFZP0C0S5 128 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 RALBP11234 206 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 PTGER4P35408 488 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 GABRA4P48169 554 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 PRLHRP49683 370 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 ZNF169Q14929 603 aaPredicted RBP17.91■□□□□ 0.46
TPM1-226ENST00000560959 PRKD1Q15139 912 aaPredicted RBP17.91■□□□□ 0.46
TPM1-226ENST00000560959 ZXDCQ2QGD7 858 aaPredicted RBP17.91■□□□□ 0.46
TPM1-226ENST00000560959 NKAIN1Q4KMZ8 207 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms