RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OCIAD1Q9NX40 245 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 GNPTGQ9UJJ9 305 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 TEX264Q9Y6I9 313 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 COLEC10Q9Y6Z7 277 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 PTPRQQ9UMZ3 2332 aa14.87□□□□□ -0.03
SNRPA1-213ENST00000560856 ZFHX4Q86UP3 3567 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 UBA6A0AVT1 1052 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 OR5K3A6NET4 321 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 B4E171 279 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 C9orf172C9J069 976 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 E7ESA3 106 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 IFRD1O00458 451 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 NVLO15381 856 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 TTC4O95801 387 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 ESR1P03372 595 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 JMJD7P0C870 316 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 FMO4P31512 558 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 SLC5A2P31639 672 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 TSPAN7P41732 249 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 ELK3P41970 407 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 CSE1LP55060 971 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 EIF3BP55884 814 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 HSPA14Q0VDF9 509 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 GBX1Q14549 363 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 HSP90AA5PQ58FG0 334 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 RNF187Q5TA31 235 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 PTRHD1Q6GMV3 140 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 ZNF549Q6P9A3 640 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 ZNF449Q6P9G9 518 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 MAATS1Q7Z4T9 603 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 PRSS42Q7Z5A4 293 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 PDIK1LQ8N165 341 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 OTUD6BQ8N6M0 293 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 ACVR1CQ8NER5 493 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 OR5AR1Q8NGP9 310 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 ASZ1Q8WWH4 475 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 USP7Q93009 1102 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 PMEPA1Q969W9 287 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 NAT9Q9BTE0 207 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 B3GNT4Q9C0J1 378 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 TWSG1Q9GZX9 223 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 TFB2MQ9H5Q4 396 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 LATS2Q9NRM7 1088 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 C20orf96Q9NUD7 363 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 INTS10Q9NVR2 710 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 SIDT1Q9NXL6 827 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 GRHL1Q9NZI5 618 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 GALPQ9UBC7 116 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 KLHL3Q9UH77 587 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 FBXO5Q9UKT4 447 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 ACSL6Q9UKU0 697 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 CRYL1Q9Y2S2 319 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 MED16Q9Y2X0 877 aa14.86□□□□□ -0.03
SNRPA1-213ENST00000560856 TOX3O15405 576 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 NIPSNAP2O75323 286 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 PKMP14618 531 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 CSTF2P33240 577 aaKnown RBP eCLIP14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 SLC1A2P43004 574 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 PPM1FP49593 454 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 PRKG2Q13237 762 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 THOC5Q13769 683 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 PLCL1Q15111 1095 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 HIF1AQ16665 826 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 SPANXN3Q5MJ09 141 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 HP1BP3Q5SSJ5 553 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 STEAP4Q687X5 459 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 UNC5AQ6ZN44 842 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 SPNS2Q8IVW8 549 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 LMNTD2Q8IXW0 634 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 OR4E2Q8NGC2 313 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 OR52E1Q8NGJ3 308 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 KLHL6Q8WZ60 621 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 LRRC39Q96DD0 335 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 PANX3Q96QZ0 392 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 HGH1Q9BTY7 390 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 FBXO6Q9NRD1 293 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 HRASLS2Q9NWW9 162 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 FOXJ2Q9P0K8 574 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 AKAP7Q9P0M2 348 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 WHRNQ9P202 907 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 PCDHGA3Q9Y5H0 932 aa14.85□□□□□ -0.03
SNRPA1-213ENST00000560856 OR6C74A6NCV1 312 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 EFCAB7A8K855 629 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 BTN3A3O00478 584 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 PRAMEF10O60809 474 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 URI1O94763 535 aaPredicted RBP14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 APOA4P06727 396 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 ERVK-10P10266 1014 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 GABRB3P28472 473 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 MAPK10P53779 464 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 ARL4CP56559 192 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 PCBP4P57723 403 aaKnown RBP14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 MPP1Q00013 466 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 MC2RQ01718 297 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 KRT33BQ14525 404 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 FASTKD3Q14CZ7 662 aaKnown RBP14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 TRADDQ15628 312 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 SYTL3Q4VX76 610 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms