RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MGAT4DA6NG13 374 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 IFRD1O00458 451 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 STX7O15400 261 aaKnown RBP10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 LRRTM2O43300 516 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 HNRNPRO43390 633 aaKnown RBP10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 PRAMEF1O95521 474 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 IGHEP01854 428 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 PVRP15151 417 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 ST6GAL1P15907 406 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZFXP17010 805 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 NFKB1P19838 968 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 ITGA3P26006 1051 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 RORAP35398 523 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 CHRNA4P43681 627 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 WNT3AP56704 352 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 SIRPB2Q5JXA9 342 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 IRAK1BP1Q5VVH5 260 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZNF449Q6P9G9 518 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 DAAM2Q86T65 1068 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 TICAM1Q8IUC6 712 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 PLD5Q8N7P1 536 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 ACVR1CQ8NER5 493 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 IPMKQ8NFU5 416 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 UBE2Q2Q8WVN8 375 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 CNDP1Q96KN2 507 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 RMDN2Q96LZ7 410 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 NAP1L5Q96NT1 182 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 RANBP9Q96S59 729 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 DPH2Q9BQC3 489 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 FSD1LQ9BXM9 530 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 TXLNGQ9NUQ3 528 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 HACD3Q9P035 362 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 KLHL8Q9P2G9 620 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 IFT80Q9P2H3 777 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 FAM153AQ9UHL3 310 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 PCSK5Q92824 1860 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZGRF1Q86YA3 2104 aa10.18□□□□□ -0.78
CDC42BPB-207ENST00000560492 SVILO95425 2214 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 SEC16AO15027 2179 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 A0A1B0GTH6 734 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 CCDC66A2RUB6 948 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 WIPF3A6NGB9 483 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 PRSS44E7EML9 344 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 MASP2O00187 686 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 BTN3A1O00481 513 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 CAPN1P07384 714 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 H2AFZP0C0S5 128 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 RALBP11234 206 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 PRDX3P30048 256 aaKnown RBP10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 CA5AP35218 305 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 SSPNQ14714 243 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 SLC14A2Q15849 920 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 DEFB110Q30KQ9 67 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 TEX44Q53QW1 395 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 DCAF10Q5QP82 559 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 H2AFVQ71UI9 128 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 SLC34A3Q8N130 599 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 OR2L2Q8NH16 312 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZNF398Q8TD17 642 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZFPM2Q8WW38 1151 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 GBP5Q96PP8 586 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 HGH1Q9BTY7 390 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 DHRS4Q9BTZ2 278 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 RUBCNLQ9H714 662 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 ASB8Q9H765 288 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 P4HTMQ9NXG6 502 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 IL17CQ9P0M4 197 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 UVRAGQ9P2Y5 699 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 CRLS1Q9UJA2 301 aa10.17□□□□□ -0.78
CDC42BPB-207ENST00000560492 C2orf74A8MZ97 194 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 OR2B3O76000 313 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 CBSLP0DN79 551 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 PYGMP11217 842 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 PTPN3P26045 913 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 CBSP35520 551 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 HADHAP40939 763 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 TPM4P67936 248 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 CDC16Q13042 620 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 PRKG2Q13237 762 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 PTPRCAPQ14761 206 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 HIF1AQ16665 826 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 KAZNQ674X7 775 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 SLC9A4Q6AI14 798 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 PID1Q7Z2X4 250 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 CUZD1Q86UP6 607 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 LILRA3Q8N6C8 439 aaPredicted RBP10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 ST6GALNAC3Q8NDV1 305 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 HM13Q8TCT9 377 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 TFB1MQ8WVM0 346 aaKnown RBP10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 INPP5DQ92835 1189 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 TEKT5Q96M29 485 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 CCM2Q9BSQ5 444 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 XKR8Q9H6D3 395 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 ATP13A2Q9NQ11 1180 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 CDYLQ9Y232 598 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 NTNG1Q9Y2I2 539 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 ANKRD12Q6UB98 2062 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 PCM1Q15154 2024 aa10.16□□□□□ -0.78
CDC42BPB-207ENST00000560492 ABCA12Q86UK0 2595 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms