RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 A0A0U1RQS6 177 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 FAM95CA0A1B0GW59 222 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 D6RAR5 112 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 NTN3O00634 580 aaPredicted RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 COPEO14579 308 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 PRMT5O14744 637 aaPredicted RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 PLD2O14939 933 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 KPNA5O15131 536 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 FAM155BO75949 473 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 SYF2O95926 243 aaKnown RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 BRAFP15056 766 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 KRT4P19013 534 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 CHRM3P20309 590 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 ACRV1P26436 265 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 FMO4P31512 558 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 SLC5A2P31639 672 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 FOXN2P32314 431 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 HPDP32754 393 aaPredicted RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 ADARP55265 1226 aaKnown RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 XIAPP98170 497 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 MPP1Q00013 466 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 NFKB2Q00653 900 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 PEX6Q13608 980 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 TGIF1Q15583 401 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 TYSND1Q2T9J0 566 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 MACC1Q6ZN28 852 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 TBC1D1Q86TI0 1168 aaPredicted RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 LCA5Q86VQ0 697 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 PHYKPLQ8IUZ5 450 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 SREK1Q8WXA9 508 aaKnown RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 ASB12Q8WXK4 309 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 GLMNQ92990 594 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 CCDC74AQ96AQ1 378 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 EID2BQ96D98 161 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 LIN37Q96GY3 246 aaPredicted RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 VPS35Q96QK1 796 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 PANX3Q96QZ0 392 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 ABCG8Q9H221 673 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 SYTL2Q9HCH5 934 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 SSU72Q9NP77 194 aaKnown RBP11.58□□□□□ -0.56
LDLR-212ENST00000560467 CTNNAL1Q9UBT7 734 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 ACOT9Q9Y305 439 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 TRPM6Q9BX84 2022 aa11.58□□□□□ -0.56
LDLR-212ENST00000560467 RP1P56715 2156 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 A0A087X1B8 175 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 AGRPO00253 132 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 NOBOXO60393 691 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A9O60656 530 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 AP2A2O94973 939 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 RPLP0P05388 317 aaKnown RBP11.57□□□□□ -0.56
LDLR-212ENST00000560467 PKMP14618 531 aaKnown RBP11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A6P19224 532 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A1P22309 533 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A4P22310 534 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 GCAP28676 217 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A3P35503 534 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A5P35504 534 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 RAB10P61026 200 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 CCL7P80098 99 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 PPARDQ03181 441 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
LDLR-212ENST00000560467 BMPR2Q13873 1038 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 PTK2BQ14289 1009 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 IRF4Q15306 451 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 ALG11Q2TAA5 492 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 TTLL9Q3SXZ7 439 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 LINC00303Q3SY05 128 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 TUBB8Q3ZCM7 444 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 ATP13A5Q4VNC0 1218 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 TRABD2AQ86V40 505 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 HID1Q8IV36 788 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 SDR16C5Q8N3Y7 309 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 FBXO39Q8N4B4 442 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 ARL10Q8N8L6 244 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 TP53I13Q8NBR0 393 aaPredicted RBP11.57□□□□□ -0.56
LDLR-212ENST00000560467 WDR48Q8TAF3 677 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 EXTL1Q92935 676 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 SCAMP4Q969E2 229 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 GLYATL1Q969I3 302 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 ARL8AQ96BM9 186 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 ZNF514Q96K75 400 aaPredicted RBP11.57□□□□□ -0.56
LDLR-212ENST00000560467 GPR22Q99680 433 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 SELENOSQ9BQE4 189 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 VPS11Q9H270 941 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A7Q9HAW7 530 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A10Q9HAW8 530 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 UGT1A8Q9HAW9 530 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 PHPT1Q9NRX4 125 aaPredicted RBP11.57□□□□□ -0.56
LDLR-212ENST00000560467 SMOXQ9NWM0 555 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 MARCH4Q9P2E8 410 aaPredicted RBP11.57□□□□□ -0.56
LDLR-212ENST00000560467 GRID1Q9ULK0 1009 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 MTO1Q9Y2Z2 717 aaKnown RBP11.57□□□□□ -0.56
LDLR-212ENST00000560467 PSAT1Q9Y617 370 aa11.57□□□□□ -0.56
LDLR-212ENST00000560467 KIF26BQ2KJY2 2108 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 A0A096LPK6 155 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 A0A1W2PQM1 296 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 PABPN1LA6NDY0 278 aaKnown RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 ZWINTO95229 277 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 ASMTLO95671 621 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms