RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 RALGDSQ12967 914 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 PWP1Q13610 501 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 ARHGEF7Q14155 803 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 NR6A1Q15406 480 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 LRRC36Q1X8D7 754 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 FUT11Q495W5 492 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 LIN52Q52LA3 116 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 CACHD1Q5VU97 1274 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 LRRC66Q68CR7 880 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 FAM117BQ6P1L5 589 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 CYP20A1Q6UW02 462 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 IL27RAQ6UWB1 636 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 LAYNQ6UX15 382 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 RASGRP3Q8IV61 690 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 KLHDC8AQ8IYD2 350 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 TBC1D21Q8IYX1 336 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 SFRP1Q8N474 314 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 GPR26Q8NDV2 337 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 TRPV3Q8NET8 790 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 OR52B6Q8NGF0 335 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 OR2T11Q8NH01 316 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 PROKR1Q8TCW9 393 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 USP7Q93009 1102 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 VOPP1Q96AW1 172 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 SLCO4A1Q96BD0 722 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 THAP11Q96EK4 314 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 CCDC115Q96NT0 180 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 EGFL8Q99944 293 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 SH3GL1Q99961 368 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 CORO1BQ9BR76 489 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 TMEM79Q9BSE2 394 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 C17orf80Q9BSJ5 609 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 C9orf16Q9BUW7 83 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 BOCQ9BWV1 1114 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 MRPS26Q9BYN8 205 aaKnown RBP9.52□□□□□ -0.89
RTF1-206ENST00000560447 OSBPL6Q9BZF3 934 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 PCDHAC1Q9H158 963 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 ALG2Q9H553 416 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 NSUN3Q9H649 340 aaKnown RBP9.52□□□□□ -0.89
RTF1-206ENST00000560447 BRD9Q9H8M2 597 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 TDP1Q9NUW8 608 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 CNOT6Q9ULM6 557 aaKnown RBP9.52□□□□□ -0.89
RTF1-206ENST00000560447 MAPRE3Q9UPY8 281 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 TMED5Q9Y3A6 229 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 CCL27Q9Y4X3 112 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 PRSS21Q9Y6M0 314 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 SLC4A7Q9Y6M7 1214 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 ANKRD12Q6UB98 2062 aa9.52□□□□□ -0.89
RTF1-206ENST00000560447 DENND4AQ7Z401 1863 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 A0A1B0GTL3 188 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 TRIM43BA6NCK2 446 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ASPDHA6ND91 283 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 IQCF5A8MTL0 148 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 TXNDC9O14530 226 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ZNF197O14709 1029 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ANKRD28O15084 1053 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ARPC2O15144 300 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ULK1O75385 1050 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 CLDN9O95484 217 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 FTH1P02794 183 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 IL6P05231 212 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 GSTM1P09488 218 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 C1SP09871 688 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 HIST1H2AGP0C0S8 130 aaPredicted RBP9.51□□□□□ -0.89
RTF1-206ENST00000560447 FAM58BPP0C7Q3 252 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 PRPS2P11908 318 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 PSMC3P17980 439 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 HIST1H2ADP20671 130 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ATP6V1B2P21281 511 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 AKT1P31749 480 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 SLC19A1P41440 591 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 GRIA3P42263 894 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 GNPDA1P46926 289 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 HSPA7P48741 367 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 GSK3BP49841 420 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 UFM1P61960 85 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 GSTM4Q03013 218 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 PTSQ03393 145 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 LIPEQ05469 1076 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 PCDH1Q08174 1060 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 BOP1Q14137 746 aaKnown RBP9.51□□□□□ -0.89
RTF1-206ENST00000560447 ZNF77Q15935 545 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 LRRC26Q2I0M4 334 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 AP5B1Q2VPB7 878 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 TBCELQ5QJ74 424 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 TMTC4Q5T4D3 741 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 NECAB2Q7Z6G3 386 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ZSWIM9Q86XI8 627 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 CHERPQ8IWX8 916 aaKnown RBP9.51□□□□□ -0.89
RTF1-206ENST00000560447 NRSN1Q8IZ57 195 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ALDH16A1Q8IZ83 802 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 TRAM1L1Q8N609 369 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 MRPL43Q8N983 215 aaKnown RBP9.51□□□□□ -0.89
RTF1-206ENST00000560447 L3MBTL4Q8NA19 623 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 KLHL23Q8NBE8 558 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 FAM156AQ8NDB6 213 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 PHOSPHO2Q8TCD6 241 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 LKAAEAR1Q8TD35 194 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 ZFAND2BQ8WV99 257 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 OSCP1Q8WVF1 389 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms