RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 DNASE1L3Q13609 305 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 FLNCQ14315 2725 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 PLCL1Q15111 1095 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 SKIDA1Q1XH10 827 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 GPRC6AQ5T6X5 926 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 FAM151BQ6UXP7 276 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 FAM92BQ6ZTR7 304 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 TRMT10CQ7L0Y3 403 aaKnown RBP13.26□□□□□ -0.29
SMAD3-214ENST00000560402 PID1Q7Z2X4 250 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 ZNF567Q8N184 647 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 BEND7Q8N7W2 519 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-214ENST00000560402 GPR150Q8NGU9 434 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 BLOC1S5Q8TDH9 187 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 ZFPM2Q8WW38 1151 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 OXNAD1Q96HP4 312 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-214ENST00000560402 STMN4Q9H169 189 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-214ENST00000560402 ZDHHC18Q9NUE0 388 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 GRHL1Q9NZI5 618 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 PLAAQ9Y263 795 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 WDR37Q9Y2I8 494 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 R3HDM2Q9Y2K5 976 aaKnown RBP13.26□□□□□ -0.29
SMAD3-214ENST00000560402 MRPS18BQ9Y676 258 aaKnown RBP13.26□□□□□ -0.29
SMAD3-214ENST00000560402 KCNMB2Q9Y691 235 aa13.26□□□□□ -0.29
SMAD3-214ENST00000560402 DOPEY2Q9Y3R5 2298 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 KIF1CO43896 1103 aaKnown RBP13.25□□□□□ -0.29
SMAD3-214ENST00000560402 RFPL1O75677 317 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 POP7O75817 140 aaKnown RBP13.25□□□□□ -0.29
SMAD3-214ENST00000560402 MYZAPP0CAP1 466 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 MTHFD1P11586 935 aaKnown RBP13.25□□□□□ -0.29
SMAD3-214ENST00000560402 F8A1P23610 371 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 AKT1P31749 480 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 HSD17B3P37058 310 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 CHRNA4P43681 627 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 CTSCP53634 463 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 GEMP55040 296 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 EIF3EP60228 445 aaKnown RBP13.25□□□□□ -0.29
SMAD3-214ENST00000560402 OTUD4Q01804 1114 aaKnown RBP13.25□□□□□ -0.29
SMAD3-214ENST00000560402 KLRB1Q12918 225 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 XRCC4Q13426 336 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 NOMO1Q15155 1222 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 CHRNA6Q15825 494 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 RPE65Q16518 533 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 TUBB8Q3ZCM7 444 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 ATP1A1-AS1Q5TC04 95 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 IZUMO3Q5VZ72 239 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 ITPRIPL1Q6GPH6 555 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 TCTN3Q6NUS6 607 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 C4orf22Q6V702 233 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 B4GALNT4Q76KP1 1039 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 OOSP2Q86WS3 158 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 RASGEF1AQ8N9B8 481 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 IPMKQ8NFU5 416 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 OR8K5Q8NH50 307 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 FAM76AQ8TAV0 307 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 FBXO25Q8TCJ0 367 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 ZIM3Q96PE6 472 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 GBA3Q9H227 469 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 LHX9Q9NQ69 397 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 ZNF71Q9NQZ8 489 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-214ENST00000560402 SAE1Q9UBE0 346 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-214ENST00000560402 RSPH14Q9UHP6 348 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 PADI1Q9ULC6 663 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 TP53TG5Q9Y2B4 290 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 NAV2Q8IVL1 2488 aa13.25□□□□□ -0.29
SMAD3-214ENST00000560402 SPENQ96T58 3664 aaKnown RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 HMGB1P1B2RPK0 211 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 H3BQF6 201 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 GAPDHSO14556 408 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 STX7O15400 261 aaKnown RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 CREG1O75629 220 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 ANXA9O76027 345 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 PRAMEF1O95521 474 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 MSH3P20585 1137 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 NDUFS1P28331 727 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 STIP1P31948 543 aaKnown RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 ARL4DP49703 201 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 NFE2L1Q14494 772 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 TRADDQ15628 312 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 BCL7AQ4VC05 210 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 CEP85LQ5SZL2 805 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 FAM182AQ5T1J6 154 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 METRNLQ641Q3 311 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 TMEM220Q6QAJ8 160 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 ZDHHC24Q6UX98 284 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 ZC3H18Q86VM9 953 aaKnown RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 CDKL3Q8IVW4 592 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 APLFQ8IW19 511 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 SLC25A41Q8N5S1 370 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 ARFGAP2Q8N6H7 521 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 SLC35B2Q8TB61 432 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 ACTL9Q8TC94 416 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 CT55Q8WUE5 264 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 ELMO2Q96JJ3 720 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 LINC00615Q96LM1 132 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 PPP1R2P1Q96PQ5 205 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 SH3GL2Q99962 352 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 C19orf43Q9BQ61 176 aa13.24□□□□□ -0.29
SMAD3-214ENST00000560402 IMP3Q9NV31 184 aaKnown RBP13.24□□□□□ -0.29
SMAD3-214ENST00000560402 ACSL5Q9ULC5 683 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms