RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 LAMA1P25391 3075 aa9.17□□□□□ -0.94
HERC1-206ENST00000559996 A0A1B0GTQ1 180 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 KLHL33A6NCF5 533 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 HMGB1P1B2RPK0 211 aaPredicted RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 G3V2L1 256 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 YY2O15391 372 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 PRPF4O43172 522 aaKnown RBP eCLIP9.16□□□□□ -0.94
HERC1-206ENST00000559996 PSIP1O75475 530 aaKnown RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 PIAS2O75928 621 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 PROCP04070 461 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 APOA4P06727 396 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 GSTA1P08263 222 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 DHRS4L1P0CG22 281 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 GNSP15586 552 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 DGKAP23743 735 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 RPL10P27635 214 aaKnown RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 RPA3P35244 121 aaPredicted RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 NBL1P41271 181 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 SLC18A1P54219 525 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 SLC12A2P55011 1212 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 WDR4P57081 412 aaKnown RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 ABRQ12979 859 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 GRIK2Q13002 908 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 LRP8Q14114 963 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 BOP1Q14137 746 aaKnown RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 TCEA2Q15560 299 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 TEAD4Q15561 434 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 PHKG1Q16816 387 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 HLA-BQ31612 363 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 CCSMST1Q4G0I0 132 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 PRRT3Q5FWE3 981 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 TECRLQ5HYJ1 363 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 SWT1Q5T5J6 900 aaKnown RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 N4BP2L1Q5TBK1 243 aaPredicted RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 AGAP9Q5VTM2 703 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 IYDQ6PHW0 289 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 ZC3H14Q6PJT7 736 aaKnown RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 OGFOD3Q6PK18 319 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 LVRNQ6Q4G3 990 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 DBX2Q6ZNG2 339 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 RAPH1Q70E73 1250 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 CCDC91Q7Z6B0 441 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 C17orf82Q86X59 251 aaPredicted RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 NAGSQ8N159 534 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 CEP76Q8TAP6 659 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 APOPT1Q96IL0 206 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 PKNOX2Q96KN3 472 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 RMDN2Q96LZ7 410 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 ELF4Q99607 663 aaPredicted RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 NRTNQ99748 197 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 PRRX2Q99811 253 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 MENTQ9BUN1 341 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 TWSG1Q9GZX9 223 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 TFB2MQ9H5Q4 396 aaKnown RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 DNAJC28Q9NX36 388 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 TAAR2Q9P1P5 351 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 ZNF624Q9P2J8 865 aaPredicted RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 FAM8A1Q9UBU6 413 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 SUSD2Q9UGT4 822 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 TLK1Q9UKI8 766 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 ACSL5Q9ULC5 683 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 GRID1Q9ULK0 1009 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 SLC6A14Q9UN76 642 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 PSMD13Q9UNM6 376 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 SMG5Q9UPR3 1016 aaKnown RBP9.16□□□□□ -0.94
HERC1-206ENST00000559996 PDE10AQ9Y233 779 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 PCDHGA5Q9Y5G8 931 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 CABIN1Q9Y6J0 2220 aa9.16□□□□□ -0.94
HERC1-206ENST00000559996 KRT87PA6NCN2 255 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 H3BM21 787 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 KLK8O60259 260 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 PLIN3O60664 434 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 C1orf105O95561 183 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 RETP07949 1114 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 ENO3P13929 434 aaPredicted RBP9.15□□□□□ -0.94
HERC1-206ENST00000559996 TFEBP19484 476 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 MPLP40238 635 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 SLC19A1P41440 591 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 ACTR1BP42025 376 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 DPP6P42658 865 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 GLRBP48167 497 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 CCT5P48643 541 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 BLKP51451 505 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 C21orf59P57076 290 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 ACTR1AP61163 376 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 HNRNPKP61978 463 aaKnown RBP eCLIP9.15□□□□□ -0.94
HERC1-206ENST00000559996 PLOD1Q02809 727 aaPredicted RBP9.15□□□□□ -0.94
HERC1-206ENST00000559996 TSNQ15631 228 aaKnown RBP9.15□□□□□ -0.94
HERC1-206ENST00000559996 RPE65Q16518 533 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 UAP1L1Q3KQV9 507 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 TRIM61Q5EBN2 209 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.15□□□□□ -0.94
HERC1-206ENST00000559996 CES4AQ5XG92 561 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 LAIR1Q6GTX8 287 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 TCEAL6Q6IPX3 200 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 ATG14Q6ZNE5 492 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 PDZD3Q86UT5 571 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 PHC3Q8NDX5 983 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 ZNF548Q8NEK5 533 aaPredicted RBP9.15□□□□□ -0.94
HERC1-206ENST00000559996 OR2I1PQ8NGU4 316 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms