RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 HRASLS5Q96KN8 279 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 BMFQ96LC9 184 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SRPK1Q96SB4 655 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 COPS8Q99627 209 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 GPR21Q99679 349 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 GPR22Q99680 433 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 NRTNQ99748 197 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 CPNE1Q99829 537 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SH3GL2Q99962 352 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 AARSD1Q9BTE6 412 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 ZSCAN5AQ9BUG6 496 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 APOOQ9BUR5 198 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 VPS11Q9H270 941 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 RHOJQ9H4E5 214 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 FGF22Q9HCT0 170 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 ACSS2Q9NR19 701 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 AASDHPPTQ9NRN7 309 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SNX15Q9NRS6 342 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 TMEM74BQ9NUR3 256 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SMOXQ9NWM0 555 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 TXNDC16Q9P2K2 825 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SLC17A7Q9P2U7 560 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 NFKBIL1Q9UBC1 381 aaPredicted RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 SLC23A2Q9UGH3 650 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 CIDEBQ9UHD4 219 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 LGALS13Q9UHV8 139 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 MOSPD1Q9UJG1 213 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 APPL1Q9UKG1 709 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 KCNK6Q9Y257 313 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 DNAJC16Q9Y2G8 782 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 ST14Q9Y5Y6 855 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 R4GN57 208 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SDK1Q7Z5N4 2213 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 THADAQ6YHU6 1953 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 FRYLO94915 3013 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 PRAMEF33A0A0G2JMD5 474 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 A0A1W2PPC4 97 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 A0A1W2PR77 199 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 RGSL1A5PLK6 1076 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 NPEPPSL1A6NEC2 478 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 AGAP14A8MT82 685 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 PRMT5O14744 637 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 FPGTO14772 594 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CDH16O75309 829 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TCEA3O75764 348 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 ASMTLO95671 621 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CEACAM5P06731 702 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 MYZAPP0CAP1 466 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SP9P0CG40 484 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SLC35E2BP0CK96 405 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 MYCLP1P12525 358 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 ACP5P13686 325 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 ATP1B2P14415 290 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 PKMP14618 531 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 KRT4P19013 534 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CHRM3P20309 590 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 FDXRP22570 491 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 AK4P27144 223 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 OXTRP30559 389 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 AKT2P31751 481 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CCR7P32248 378 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SPRP35270 261 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 MAGEA9P43362 315 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 BDKRB1P46663 353 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 GNPDA1P46926 289 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 GLRBP48167 497 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TTPAP49638 278 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CSNK1EP49674 416 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 SERPINB8P50452 374 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CCR5P51681 352 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CLCN7P51798 805 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 PFN3P60673 137 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 IRX4P78413 519 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 IL9RQ01113 521 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 BNC1Q01954 994 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 DPTQ07507 201 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TMEM115Q12893 351 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 EIF2B5Q13144 721 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 NAB1Q13506 487 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 MPP2Q14168 576 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 NFE2L1Q14494 772 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 NFATC4Q14934 902 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 ZKSCAN8Q15776 578 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 SEPT7Q16181 437 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 PLK5Q496M5 336 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 USP39Q53GS9 565 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 ACSBG2Q5FVE4 666 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 FBXO48Q5FWF7 155 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 AARS2Q5JTZ9 985 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 LDLRAP1Q5SW96 308 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 PMS2CLQ68D20 193 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 DUS1LQ6P1R4 473 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 TMEM220Q6QAJ8 160 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 PAQR3Q6TCH7 311 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 ENPP7Q6UWV6 458 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 KYAT3Q6YP21 454 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 PRR23BQ6ZRT6 265 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 Q6ZSR6 202 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 KIAA0408Q6ZU52 694 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms