RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MAGEL2Q9UJ55 1249 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ZNF490Q9ULM2 529 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 KRT87PA6NCN2 255 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ARNTLO00327 626 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 B3GALT4O96024 378 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 GGT1P19440 569 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 JAK1P23458 1154 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 DGKAP23743 735 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ELK4P28324 431 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 CD70P32970 193 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 SHMT2P34897 504 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 CTSOP43234 321 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 STK19P49842 368 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ATN1P54259 1190 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 HPCAP84074 193 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 PMS2P3Q13401 168 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 VEPH1Q14D04 833 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 LRRC73Q5JTD7 316 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 GPRC6AQ5T6X5 926 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ABRAXAS1Q6UWZ7 409 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ZNF783Q6ZMS7 281 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ITIH5Q86UX2 942 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 RGL4Q8IZJ4 473 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 GPR26Q8NDV2 337 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 GTF2H4Q92759 462 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ISOC1Q96CN7 298 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 PPP3R2Q96LZ3 170 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 THUMPD3Q9BV44 507 aaKnown RBP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 LATS2Q9NRM7 1088 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 SLC6A13Q9NSD5 602 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ZNF639Q9UID6 485 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 KANSL1LA0AUZ9 987 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 NPIPB15A6NHN6 443 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 TRIM64CA6NLI5 447 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 GFRA2O00451 464 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 SEC22BO75396 215 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 KCNH1O95259 989 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 ADARB1P78563 741 aaKnown RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 LMAN2Q12907 356 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 DGKKQ5KSL6 1271 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 Q6ZNB5 142 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 ERI1Q8IV48 349 aaKnown RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 HS3ST5Q8IZT8 346 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 B4GALNT2Q8NHY0 566 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 GAB3Q8WWW8 586 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 C12orf43Q96C57 262 aaKnown RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 TRMT2BQ96GJ1 504 aaKnown RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 DCUN1D5Q9BTE7 237 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 SLC25A37Q9NYZ2 338 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 MBD1Q9UIS9 605 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 PCDHGA11Q9Y5H2 935 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 ANKRD33BA6NCL7 494 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 MANBAO00462 879 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 GSTA4O15217 222 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 RGS14O43566 566 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 FOXD2O60548 495 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 ZNF821O75541 412 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 NPPAP01160 153 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 SOD2P04179 222 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 GJA1P17302 382 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 HOXD10P28358 340 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 POLR2IP36954 125 aaKnown RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 MTHFRP42898 656 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 STT3AP46977 705 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 MAPK10P53779 464 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 CYP4F3Q08477 520 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 ARHGEF7Q14155 803 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 IMPG1Q17R60 797 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 ZBED5Q49AG3 693 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 USP51Q70EK9 711 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 PATL1Q86TB9 770 aaKnown RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 STK32CQ86UX6 486 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 BBS7Q8IWZ6 715 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 C10orf111Q8N326 155 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 OR2T12Q8NG77 320 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 DTNBP1Q96EV8 351 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 AURKBQ96GD4 344 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 CEP295NLQ96MC4 621 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 MUS81Q96NY9 551 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 BDH2Q9BUT1 245 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 DPY30Q9C005 99 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 NAA50Q9GZZ1 169 aaKnown RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 POLR1BQ9H9Y6 1135 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 EIF3LQ9Y262 564 aaKnown RBP9.84□□□□□ -0.83
LRRC28-216ENST00000559819 ANAPC1Q9H1A4 1944 aa9.84□□□□□ -0.83
LRRC28-216ENST00000559819 TRBV5-4A0A0C4DH59 114 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 K7EPI3 171 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 AREL1O15033 823 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 SPAM1P38567 509 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 ARSFP54793 590 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 ESRRGP62508 458 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 RAB39AQ14964 217 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 NEDD8Q15843 81 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 CPSF6Q16630 551 aaKnown RBP eCLIP9.84□□□□□ -0.84
LRRC28-216ENST00000559819 GPR107Q5VW38 600 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 TMEM26Q6ZUK4 368 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 KCTD8Q6ZWB6 473 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 DET1Q7L5Y6 550 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 ULK4Q96C45 1275 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 ZBTB18Q99592 522 aa9.84□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms