RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CAPN10Q9HC96 672 aa16.22■□□□□ 0.19
TPM1-219ENST00000559397 FAM86C1Q9NVL1 165 aa16.22■□□□□ 0.19
TPM1-219ENST00000559397 KLQ9UEF7 1012 aa16.22■□□□□ 0.19
TPM1-219ENST00000559397 KLF15Q9UIH9 416 aa16.22■□□□□ 0.19
TPM1-219ENST00000559397 GNPTGQ9UJJ9 305 aa16.22■□□□□ 0.19
TPM1-219ENST00000559397 DGKBQ9Y6T7 804 aa16.22■□□□□ 0.19
TPM1-219ENST00000559397 PATE3B3GLJ2 98 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 GRID2O43424 1007 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 MPLP40238 635 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 PRLHRP49683 370 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 PYCR3Q53H96 274 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 PLA2G2CQ5R387 149 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 C11orf96Q7Z7L8 435 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 BEND7Q8N7W2 519 aaPredicted RBP16.21■□□□□ 0.19
TPM1-219ENST00000559397 KIAA1191Q96A73 305 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 PDLIM5Q96HC4 596 aaKnown RBP16.21■□□□□ 0.19
TPM1-219ENST00000559397 ZNF514Q96K75 400 aaPredicted RBP16.21■□□□□ 0.19
TPM1-219ENST00000559397 LINC00615Q96LM1 132 aaPredicted RBP16.21■□□□□ 0.19
TPM1-219ENST00000559397 CYP4F12Q9HCS2 524 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 ABCF3Q9NUQ8 709 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 KCNK4Q9NYG8 393 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 HAO1Q9UJM8 370 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 DCTN4Q9UJW0 460 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 DNAJC16Q9Y2G8 782 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 PRKAB1Q9Y478 270 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 SNX11Q9Y5W9 270 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 PCDH15Q96QU1 1955 aa16.21■□□□□ 0.19
TPM1-219ENST00000559397 TMEM131Q92545 1883 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 A8MT66 165 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 IQCF5A8MTL0 148 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 F8W8V4 182 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 OR56A5P0C7T3 313 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 CHRM3P20309 590 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 NAGLUP54802 743 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 NFKB2Q00653 900 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 OR4D1Q15615 310 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 ZNF542PQ5EBM4 170 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 PTRHD1Q6GMV3 140 aaKnown RBP16.21■□□□□ 0.18
TPM1-219ENST00000559397 LRRTM4Q86VH4 590 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 TRAPPC5Q8IUR0 188 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 SIDT2Q8NBJ9 832 aaKnown RBP16.21■□□□□ 0.18
TPM1-219ENST00000559397 PIWIL2Q8TC59 973 aaKnown RBP16.21■□□□□ 0.18
TPM1-219ENST00000559397 LKAAEAR1Q8TD35 194 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 PPP4R1Q8TF05 950 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 ATOH8Q96SQ7 321 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 SIKE1Q9BRV8 207 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 ERVMER34-1Q9H9K5 563 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 CARS2Q9HA77 564 aaKnown RBP16.21■□□□□ 0.18
TPM1-219ENST00000559397 LATS2Q9NRM7 1088 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 GULP1Q9UBP9 304 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 ZNHIT2Q9UHR6 403 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 MOSPD1Q9UJG1 213 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 SLC6A14Q9UN76 642 aa16.21■□□□□ 0.18
TPM1-219ENST00000559397 KNL1Q8NG31 2342 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 MUC6Q6W4X9 2439 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 E5RI56 91 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 QSOX1O00391 747 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 NPHS1O60500 1241 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 IPO13O94829 963 aaKnown RBP16.2■□□□□ 0.18
TPM1-219ENST00000559397 TNFP01375 233 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 CSF2P04141 144 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 RETP07949 1114 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 ALOX15P16050 662 aaPredicted RBP16.2■□□□□ 0.18
TPM1-219ENST00000559397 SERPINB5P36952 375 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 GNPDA1P46926 289 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 HK3P52790 923 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 ARFIP2P53365 341 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 GRIK2Q13002 908 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 RCN2Q14257 317 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 LACTB2Q53H82 288 aaPredicted RBP16.2■□□□□ 0.18
TPM1-219ENST00000559397 TRIM61Q5EBN2 209 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 CRTC3Q6UUV7 619 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 CCDC121Q6ZUS5 278 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 RD3Q7Z3Z2 195 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 PIWIL4Q7Z3Z4 852 aaKnown RBP16.2■□□□□ 0.18
TPM1-219ENST00000559397 GALNT13Q8IUC8 556 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 HID1Q8IV36 788 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 SLC22A9Q8IVM8 553 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 INPP5DQ92835 1189 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 TCEAL2Q9H3H9 227 aaPredicted RBP16.2■□□□□ 0.18
TPM1-219ENST00000559397 FSCN3Q9NQT6 498 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 TM7SF3Q9NS93 570 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 KLHL42Q9P2K6 505 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 IKZF3Q9UKT9 509 aa16.2■□□□□ 0.18
TPM1-219ENST00000559397 DNMT3AQ9Y6K1 912 aaPredicted RBP16.2■□□□□ 0.18
TPM1-219ENST00000559397 A0A0G2JND7 137 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 KMOO15229 486 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 KERAO60938 352 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 POP7O75817 140 aaKnown RBP16.19■□□□□ 0.18
TPM1-219ENST00000559397 RASGRP1O95267 797 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 CFIP05156 583 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 MTHFD2P13995 350 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 NME1P15531 152 aaKnown RBP16.19■□□□□ 0.18
TPM1-219ENST00000559397 IL2P60568 153 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 CCDC6Q16204 474 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 GALNTL6Q49A17 601 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
TPM1-219ENST00000559397 ZNF658BQ4V348 819 aaPredicted RBP16.19■□□□□ 0.18
TPM1-219ENST00000559397 XKR5Q6UX68 686 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms