RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ENO3P13929 434 aaPredicted RBP21.15■□□□□ 0.98
SNX1-206ENST00000559389 SPRP35270 261 aaPredicted RBP21.15■□□□□ 0.98
SNX1-206ENST00000559389 SKIV2L2P42285 1042 aaKnown RBP21.15■□□□□ 0.98
SNX1-206ENST00000559389 GPR3P46089 330 aa21.15■□□□□ 0.98
SNX1-206ENST00000559389 ID4P47928 161 aa21.15■□□□□ 0.98
SNX1-206ENST00000559389 TAS2R39P59534 338 aa21.15■□□□□ 0.98
SNX1-206ENST00000559389 SLC29A2Q14542 456 aa21.15■□□□□ 0.98
SNX1-206ENST00000559389 TMEM26Q6ZUK4 368 aa21.15■□□□□ 0.98
SNX1-206ENST00000559389 SPRED1Q7Z699 444 aa21.15■□□□□ 0.98
SNX1-206ENST00000559389 ZNF761Q86XN6 746 aaPredicted RBP21.15■□□□□ 0.98
SNX1-206ENST00000559389 SLC44A1Q8WWI5 657 aa21.15■□□□□ 0.98
SNX1-206ENST00000559389 PAFAH2Q99487 392 aa21.15■□□□□ 0.98
SNX1-206ENST00000559389 APOBEC2Q9Y235 224 aaKnown RBP21.15■□□□□ 0.98
SNX1-206ENST00000559389 MTO1Q9Y2Z2 717 aaKnown RBP21.15■□□□□ 0.98
SNX1-206ENST00000559389 ITGA2BP08514 1039 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 CBSLP0DN79 551 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 NDUFS1P28331 727 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 CBSP35520 551 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 PDAP1Q13442 181 aaKnown RBP21.14■□□□□ 0.97
SNX1-206ENST00000559389 GPR18Q14330 331 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 UAP1Q16222 522 aaPredicted RBP21.14■□□□□ 0.97
SNX1-206ENST00000559389 UNC5DQ6UXZ4 953 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 NEK10Q6ZWH5 1172 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 SLCO6A1Q86UG4 719 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 UBLCP1Q8WVY7 318 aaPredicted RBP21.14■□□□□ 0.97
SNX1-206ENST00000559389 MRRFQ96E11 262 aaKnown RBP21.14■□□□□ 0.97
SNX1-206ENST00000559389 SLC38A3Q99624 504 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 DHRS4Q9BTZ2 278 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.14■□□□□ 0.97
SNX1-206ENST00000559389 KIR3DX1Q9H7L2 352 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 MVB12BQ9H7P6 319 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 ASF1AQ9Y294 204 aa21.14■□□□□ 0.97
SNX1-206ENST00000559389 COL27A1Q8IZC6 1860 aaPredicted RBP21.13■□□□□ 0.97
SNX1-206ENST00000559389 DNAH14Q0VDD8 3507 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 EXOC1LA0A1B0GW35 172 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 INHBAP08476 426 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 ZNF37AP17032 561 aaPredicted RBP21.13■□□□□ 0.97
SNX1-206ENST00000559389 KCNA4P22459 653 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 PGGT1BP53609 377 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 EPHA4P54764 986 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 POU4F1Q01851 419 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 CCDC157Q569K6 752 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 PPM1JQ5JR12 505 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 PAQR3Q6TCH7 311 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 OR5AR1Q8NGP9 310 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 ZFPM2Q8WW38 1151 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 HGH1Q9BTY7 390 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 POPDC3Q9HBV1 291 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 SLC24A2Q9UI40 661 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 TSR3Q9UJK0 312 aaKnown RBP21.13■□□□□ 0.97
SNX1-206ENST00000559389 SLC39A10Q9ULF5 831 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 RUVBL2Q9Y230 463 aaKnown RBP21.13■□□□□ 0.97
SNX1-206ENST00000559389 COLEC10Q9Y6Z7 277 aa21.13■□□□□ 0.97
SNX1-206ENST00000559389 DMXL1Q9Y485 3027 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 PCNX2A6NKB5 2137 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 MATN4O95460 622 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 MPC1LP0DKB6 136 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 CDK4P11802 303 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 SAT1P21673 171 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 RGS4P49798 205 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 ZKSCAN8Q15776 578 aaPredicted RBP21.12■□□□□ 0.97
SNX1-206ENST00000559389 LRRC8EQ6NSJ5 796 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 CEP97Q8IW35 865 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 TBC1D21Q8IYX1 336 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 Q8N9G6 341 aaPredicted RBP21.12■□□□□ 0.97
SNX1-206ENST00000559389 PHC3Q8NDX5 983 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 OR5K2Q8NHB8 316 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 SKA2Q8WVK7 121 aaPredicted RBP21.12■□□□□ 0.97
SNX1-206ENST00000559389 TSPAN17Q96FV3 270 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 FERD3LQ96RJ6 166 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 TRIT1Q9H3H1 467 aaKnown RBP21.12■□□□□ 0.97
SNX1-206ENST00000559389 CAB39LQ9H9S4 337 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 KCNK4Q9NYG8 393 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 FETUBQ9UGM5 382 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 ZNF180Q9UJW8 692 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 NFS1Q9Y697 457 aa21.12■□□□□ 0.97
SNX1-206ENST00000559389 IGHV1OR21-1A0A087WYE8 117 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 HMX2A2RU54 273 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 POC1B-GALNT4F8VUJ3 575 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 B4GAT1O43505 415 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 OPA1O60313 960 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 WISP3O95389 354 aaPredicted RBP21.11■□□□□ 0.97
SNX1-206ENST00000559389 TSPAN12O95859 305 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 RPLP0P05388 317 aaKnown RBP21.11■□□□□ 0.97
SNX1-206ENST00000559389 GCAP28676 217 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 ALDH4A1P30038 563 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 HSD17B3P37058 310 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 SLC12A2P55011 1212 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 OR1D5P58170 312 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 E2F1Q01094 437 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 ABRQ12979 859 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 BMPR2Q13873 1038 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 KRT33BQ14525 404 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 ZNF460Q14592 562 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 USP10Q14694 798 aaKnown RBP21.11■□□□□ 0.97
SNX1-206ENST00000559389 PIWIL4Q7Z3Z4 852 aaKnown RBP21.11■□□□□ 0.97
SNX1-206ENST00000559389 RASGRP3Q8IV61 690 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 DCUN1D3Q8IWE4 304 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 DCAKDQ8WVC6 231 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 LINGO1Q96FE5 620 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms