RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 C9orf43Q8TAL5 461 aaPredicted RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 MPLKIPQ8TAP9 179 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 SSMEM1Q8WWF3 244 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 DNASE1L2Q92874 299 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 THOC1Q96FV9 657 aaKnown RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 OXNAD1Q96HP4 312 aaPredicted RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 C3orf30Q96M34 536 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 MUS81Q96NY9 551 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 TMEM237Q96Q45 408 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 CSF3RQ99062 836 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 PKP4Q99569 1192 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 GFI1Q99684 422 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 MRIQ9BWK5 157 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 PRRG4Q9BZD6 226 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 RBM38Q9H0Z9 239 aaKnown RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 R3HDMLQ9H3Y0 253 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 AKIRIN1Q9H9L7 192 aaPredicted RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 CDH20Q9HBT6 801 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 TUFT1Q9NNX1 390 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 MYNNQ9NPC7 610 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 IARS2Q9NSE4 1012 aaKnown RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 DNAJC17Q9NVM6 304 aaKnown RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 CNIH4Q9P003 139 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 TXNDC16Q9P2K2 825 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 GAGE2DQ9UEU5 116 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 HOOK1Q9UJC3 728 aaKnown RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 LEF1Q9UJU2 399 aaPredicted RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 ING1Q9UK53 422 aaPredicted RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 FBXL5Q9UKA1 691 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 FBXW2Q9UKT8 454 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 ABT1Q9ULW3 272 aaKnown RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 PADI3Q9ULW8 664 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 STX8Q9UNK0 236 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 CHKBQ9Y259 395 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 AMDHD2Q9Y303 409 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 TMEM184BQ9Y519 407 aaPredicted RBP2.23□□□□□ -2.05
GABPB1-209ENST00000559100 TRIM17Q9Y577 477 aa2.23□□□□□ -2.05
GABPB1-209ENST00000559100 PTPRCP08575 1304 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 ZNF541Q9H0D2 1346 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 IGHV4-28A0A0C4DH34 117 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 MED19A0JLT2 244 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 ELOVL7A1L3X0 281 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 GOLGA6L9A6NEM1 432 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 WIPF3A6NGB9 483 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 OR6C75A6NL08 312 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 HEPACAM2A8MVW5 462 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CTDSPLO15194 276 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PPIP5K2O43314 1243 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SPRY3O43610 288 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 GPR137BO60478 399 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 KCNJ13O60928 360 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CNOT3O75175 753 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 RTN2O75298 545 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 DDNO94850 711 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CAMTA2O94983 1202 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SIX3O95343 332 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 GCNT3O95395 438 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 LATS1O95835 1130 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 FGBP02675 491 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 H1F0P07305 194 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 DANCRP0C864 163 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SPP1P10451 314 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 UROSP10746 265 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 EEF2P13639 858 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 DESP17661 470 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 MAPK3P27361 379 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CCND3P30281 292 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CDC25AP30304 524 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 HPDP32754 393 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 LHX1P48742 406 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PEX5P50542 639 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 MTCP1P56278 107 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 BPIFB3P59826 476 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 POLR2LP62875 67 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 FOLH1Q04609 750 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 GFPT1Q06210 699 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 DPTQ07507 201 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SRSF4Q08170 494 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 TNK1Q13470 666 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CUL3Q13618 768 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 VEZF1Q14119 521 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 DHX34Q14147 1143 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 LASP1Q14847 261 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PPA1Q15181 289 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 EZH2Q15910 746 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PKN2Q16513 984 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 KBTBD12Q3ZCT8 623 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 IQCCQ4KMZ1 466 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SLC39A12Q504Y0 691 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 DNAJC21Q5F1R6 531 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 FAM69BQ5VUD6 431 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 KLC3Q6P597 504 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 FAM198BQ6UWH4 519 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CATSPER4Q7RTX7 472 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PIGWQ7Z7B1 504 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CROCCP3Q8IVE0 287 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CCDC83Q8IWF9 413 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 ZNF34Q8IZ26 560 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CNPY4Q8N129 248 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 RYBPQ8N488 228 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms