RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 CLP1Q92989 425 aaKnown RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 TMEM125Q96AQ2 219 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 HOPXQ9BPY8 73 aaPredicted RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 ALG2Q9H553 416 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 NANOGQ9H9S0 305 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 GID8Q9NWU2 228 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ZDHHC3Q9NYG2 299 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ZNF490Q9ULM2 529 aaPredicted RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 PDE10AQ9Y233 779 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 C15orf38-AP3S2A0A0A6YYH1 394 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 TCRBV3S1A0A5B6 114 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ENO4A6NNW6 628 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 CTSLP07711 333 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ZNF26P17031 533 aaPredicted RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 RECQLP46063 649 aaPredicted RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 GSK3BP49841 420 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 CAMK1Q14012 370 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 UGT2A3Q6UWM9 527 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 HACD2Q6Y1H2 254 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 UBE2R2Q712K3 238 aaPredicted RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 ARPINQ7Z6K5 226 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 TICAM1Q8IUC6 712 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 LILRA3Q8N6C8 439 aaPredicted RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 SPPL3Q8TCT6 385 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ULK4Q96C45 1275 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 CERS4Q9HA82 394 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ABCD2Q9UBJ2 740 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 PCDHA9Q9Y5H5 950 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ATG2BQ96BY7 2078 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 A0A1W2PQ67 120 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ARPC2O15144 300 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 EFCAB14O75071 495 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 SH3BGRLO75368 114 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ULK1O75385 1050 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 SEC22BO75396 215 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 STK16O75716 305 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 STAMBPO95630 424 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 B3GALT4O96024 378 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 HSPA8P11142 646 aaKnown RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 POLR2EP19388 210 aaKnown RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 ITPKAP23677 461 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 VIPR2P41587 438 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 TRAP1Q12931 704 aaKnown RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 TBCELQ5QJ74 424 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 RGL4Q8IZJ4 473 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 ITFG1Q8TB96 612 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 LYSMD1Q96S90 227 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 SEPHS2Q99611 448 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 BRINP2Q9C0B6 783 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 SLC24A3Q9HC58 644 aa10.41□□□□□ -0.74
CUX1-217ENST00000558836 MRPL40Q9NQ50 206 aaKnown RBP10.41□□□□□ -0.74
CUX1-217ENST00000558836 GRXCR1A8MXD5 290 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 PLK4O00444 970 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 ATP6V1B1P15313 513 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 EPB42P16452 691 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 CEBPBP17676 345 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 RPL10P27635 214 aaKnown RBP10.4□□□□□ -0.74
CUX1-217ENST00000558836 SLC7A1P30825 629 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 BMPR1AP36894 532 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 PRKG2Q13237 762 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 GRIN2CQ14957 1233 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 CYP51A1Q16850 503 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 C12orf40Q86WS4 652 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 SFTPA1Q8IWL2 248 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 CBARPQ8N350 705 aaPredicted RBP10.4□□□□□ -0.74
CUX1-217ENST00000558836 LMNTD1Q8N9Z9 388 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 ADCY4Q8NFM4 1077 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 MCCC1Q96RQ3 725 aaPredicted RBP10.4□□□□□ -0.74
CUX1-217ENST00000558836 P2RY13Q9BPV8 354 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 KCTD14Q9BQ13 255 aaPredicted RBP10.4□□□□□ -0.74
CUX1-217ENST00000558836 WRAP53Q9BUR4 548 aaKnown RBP10.4□□□□□ -0.74
CUX1-217ENST00000558836 ACTR8Q9H981 624 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 PCDH12Q9NPG4 1184 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 MAFFQ9ULX9 164 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 ERVW-1Q9UQF0 538 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 SLC22A14Q9Y267 594 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 ST14Q9Y5Y6 855 aa10.4□□□□□ -0.74
CUX1-217ENST00000558836 AGAP14A8MT82 685 aa10.4□□□□□ -0.75
CUX1-217ENST00000558836 K7EPI3 171 aa10.4□□□□□ -0.75
CUX1-217ENST00000558836 EPORP19235 508 aa10.4□□□□□ -0.75
CUX1-217ENST00000558836 SULT1C3Q6IMI6 304 aa10.4□□□□□ -0.75
CUX1-217ENST00000558836 EFL1Q7Z2Z2 1120 aaKnown RBP10.4□□□□□ -0.75
CUX1-217ENST00000558836 GFM2Q969S9 779 aaKnown RBP10.4□□□□□ -0.75
CUX1-217ENST00000558836 GBP5Q96PP8 586 aa10.4□□□□□ -0.75
CUX1-217ENST00000558836 RIOK2Q9BVS4 552 aaKnown RBP10.4□□□□□ -0.75
CUX1-217ENST00000558836 KCTD5Q9NXV2 234 aa10.4□□□□□ -0.75
CUX1-217ENST00000558836 COQ6Q9Y2Z9 468 aa10.4□□□□□ -0.75
CUX1-217ENST00000558836 PLXNB3Q9ULL4 1909 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 DHRS12A0PJE2 317 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 SOCS2O14508 198 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 EEDO75530 441 aaKnown RBP10.39□□□□□ -0.75
CUX1-217ENST00000558836 ANXA5P08758 320 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 HLA-EP13747 358 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 ATP1B2P14415 290 aaPredicted RBP10.39□□□□□ -0.75
CUX1-217ENST00000558836 CHN2P52757 468 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 OR4D2P58180 307 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 ABRQ12979 859 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 IMPG1Q17R60 797 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 TTLL9Q3SXZ7 439 aa10.39□□□□□ -0.75
CUX1-217ENST00000558836 FAM174BQ3ZCQ3 159 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms