RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SLC1A2P43004 574 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 ABCG1P45844 678 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 SEPHS1P49903 392 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 SLC7A5Q01650 507 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 CRYMQ14894 314 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 FASTKD3Q14CZ7 662 aaKnown RBP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 CLPPQ16740 277 aaPredicted RBP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 LONRF1Q17RB8 773 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 TBC1D25Q3MII6 688 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 SYTL3Q4VX76 610 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 DNAJC21Q5F1R6 531 aaKnown RBP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 ZNF470Q6ECI4 717 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 IRGCQ6NXR0 463 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 ZNF549Q6P9A3 640 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 WDR74Q6RFH5 385 aaPredicted RBP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 ARHGAP22Q7Z5H3 698 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 RBM12BQ8IXT5 1001 aaKnown RBP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 PDIK1LQ8N165 341 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 LMNTD1Q8N9Z9 388 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 CFAP61Q8NHU2 1237 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 USP7Q93009 1102 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 PPM1MQ96MI6 270 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 DCBLD2Q96PD2 775 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 HGH1Q9BTY7 390 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 PDP2Q9P2J9 529 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 DKK4Q9UBT3 224 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 GNPTGQ9UJJ9 305 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 PLAGL1Q9UM63 463 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 COLEC10Q9Y6Z7 277 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 EFCAB7A8K855 629 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 GPC4O75487 556 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 C9P02748 559 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 POLR2CP19387 275 aaPredicted RBP13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 OGNP20774 298 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 CD151P48509 253 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 CARSP49589 748 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 PDIA2Q13087 525 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 RPA4Q13156 261 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 DUPD1Q68J44 220 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 ZNF449Q6P9G9 518 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 TRMT10BQ6PF06 316 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 CNSTQ6PJW8 725 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 UNC5AQ6ZN44 842 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 ZNF572Q7Z3I7 529 aaPredicted RBP13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 MAATS1Q7Z4T9 603 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 PDZD3Q86UT5 571 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 KCNMB4Q86W47 210 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 OR52E1Q8NGJ3 308 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 FGF11Q92914 225 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 TMEM159Q96B96 161 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 C9orf72Q96LT7 481 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 SLC30A3Q99726 388 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 CMKLR1Q99788 373 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 LRRC1Q9BTT6 524 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 KIR3DX1Q9H7L2 352 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 HRASLS2Q9NWW9 162 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 GRHL1Q9NZI5 618 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 FOXJ2Q9P0K8 574 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 RUVBL2Q9Y230 463 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 ASF1AQ9Y294 204 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 TDRKHQ9Y2W6 561 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 TEX264Q9Y6I9 313 aa13.46□□□□□ -0.25
TSPAN3-205ENST00000558745 C9orf172C9J069 976 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 BTN3A3O00478 584 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 GSTM1P09488 218 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 PKMP14618 531 aaKnown RBP13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 CHRM3P20309 590 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 ITPKBP27987 946 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 GABRB3P28472 473 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 SLC5A2P31639 672 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 CSTF2P33240 577 aaKnown RBP eCLIP13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 EIF2S3P41091 472 aaKnown RBP13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 CAPZBP47756 277 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 ARL4CP56559 192 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 GSTM4Q03013 218 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 TRA2AQ13595 282 aaKnown RBP eCLIP13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 HIF1AQ16665 826 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 SPANXN3Q5MJ09 141 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 C19orf48Q6RUI8 117 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 FAM129CQ86XR2 697 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 PLXDC1Q8IUK5 500 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 FBXO36Q8NEA4 188 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 HNRNPLLQ8WVV9 542 aaKnown RBP13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 ZNF578Q96N58 590 aaPredicted RBP13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 TCF12Q99081 682 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 CTRCQ99895 268 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 DPYSL5Q9BPU6 564 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 APMAPQ9HDC9 416 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 ZC3H7BQ9UGR2 993 aaKnown RBP13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 FBXO5Q9UKT4 447 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 NFS1Q9Y697 457 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 MAST4O15021 2626 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 FREM2Q5SZK8 3169 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 DMXL2Q8TDJ6 3036 aa13.45□□□□□ -0.26
TSPAN3-205ENST00000558745 MN1Q10571 1320 aaPredicted RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 ESYT3A0FGR9 886 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms