RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ERMARDQ5T6L9 678 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 ALG1LQ6GMV1 187 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 BIVMQ86UB2 503 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 AMZ2Q86W34 360 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 PHF13Q86YI8 300 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-206ENST00000558739 CARFQ8N187 725 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 BBS5Q8N3I7 341 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 TRAM1L1Q8N609 369 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 LILRA3Q8N6C8 439 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-206ENST00000558739 TEX26Q8N6G2 289 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 SIRT6Q8N6T7 355 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 ZNF655Q8N720 491 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-206ENST00000558739 LRRN4CLQ8ND94 238 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 PSMF1Q92530 271 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 SDCCAG3Q96C92 435 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 MAGED4Q96JG8 741 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 RMDN2Q96LZ7 410 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 C12orf66Q96MD2 445 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 C17orf62Q9BQA9 187 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 POLR1EQ9GZS1 481 aaKnown RBP11.44□□□□□ -0.58
SMAD3-206ENST00000558739 SOX17Q9H6I2 414 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-206ENST00000558739 ZNF160Q9HCG1 818 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 PTGFRNQ9P2B2 879 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 CTSFQ9UBX1 484 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 DNPEPQ9ULA0 475 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 PLEKHA6Q9Y2H5 1048 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 LUC7L2Q9Y383 392 aaKnown RBP11.44□□□□□ -0.58
SMAD3-206ENST00000558739 C17orf113A0A1B0GUU1 675 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 NKX2-6A6NCS4 301 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 OR2AG2A6NM03 316 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 ADAM10O14672 748 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 POP7O75817 140 aaKnown RBP11.43□□□□□ -0.58
SMAD3-206ENST00000558739 CELA2AP08217 269 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 HBQ1P09105 142 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 VCLP18206 1134 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 PPP1R2P41236 205 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 MTIF2P46199 727 aaKnown RBP11.43□□□□□ -0.58
SMAD3-206ENST00000558739 GABRA4P48169 554 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 MEOX1P50221 254 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 CDH6P55285 790 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 DCDC1P59894 354 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 RBPJQ06330 500 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 DMPKQ09013 629 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 TMEM115Q12893 351 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-206ENST00000558739 TUBB8Q3ZCM7 444 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 HSP90AA4PQ58FG1 418 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 COX15Q7KZN9 410 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 RAVER1Q8IY67 606 aaKnown RBP11.43□□□□□ -0.58
SMAD3-206ENST00000558739 GPR135Q8IZ08 494 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 DTWD1Q8N5C7 304 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 RASGEF1AQ8N9B8 481 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 CCHCR1Q8TD31 782 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 BRIX1Q8TDN6 353 aaKnown RBP11.43□□□□□ -0.58
SMAD3-206ENST00000558739 AGAP11Q8TF27 550 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 CA5BP1Q8WTZ4 195 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 CPLX3Q8WVH0 158 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-206ENST00000558739 C8orf44Q96CB5 159 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 CLSTN2Q9H4D0 955 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 SYTL2Q9HCH5 934 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 ZNF835Q9Y2P0 537 aa11.43□□□□□ -0.58
SMAD3-206ENST00000558739 DYTNA2CJ06 578 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 RGSL1A5PLK6 1076 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 ANKRD66B4E2M5 251 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 ZSCAN9O15535 394 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-206ENST00000558739 RASAL1O95294 804 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 MT-CYBP00156 380 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-206ENST00000558739 HLA-DQB2P05538 268 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 CALB1P05937 261 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 MMP2P08253 660 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 UGT1A4P22310 534 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 PSMA2P25787 234 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 MIPP30301 263 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 KLK7P49862 253 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 HSF1Q00613 529 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 FOLH1Q04609 750 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 TFF3Q07654 80 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 TMCO3Q6UWJ1 677 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 CLEC9AQ6UXN8 241 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 ZNF677Q86XU0 584 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 DNAAF3Q8N9W5 541 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 DNAJB8Q8NHS0 232 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 GDAP1Q8TB36 358 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 PROKR1Q8TCW9 393 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 LMF1Q96S06 567 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 ZNF559Q9BR84 538 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 AP1M1Q9BXS5 423 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 STK33Q9BYT3 514 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMAD3-206ENST00000558739 CBX8Q9HC52 389 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 GPAMQ9HCL2 828 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 BPIFA1Q9NP55 256 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 ZNF358Q9NW07 568 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 NFKBIL1Q9UBC1 381 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-206ENST00000558739 ST6GALNAC2Q9UJ37 374 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 ATP6V1DQ9Y5K8 247 aa11.42□□□□□ -0.58
SMAD3-206ENST00000558739 ANKRD62A6NC57 917 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 FAM90A27PA6NNH2 459 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 EIF3CLB5ME19 914 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms