RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 GSDMBQ8TAX9 411 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 MDM1Q8TC05 714 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 FBXO25Q8TCJ0 367 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 PYROXD1Q8WU10 500 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 ZFPM2Q8WW38 1151 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 RSC1A1Q92681 617 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 TFGQ92734 400 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-205ENST00000558428 ART4Q93070 314 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 FAM136AQ96C01 138 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 CCDC74BQ96LY2 380 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 CNTNAP3BQ96NU0 1288 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 CNTNAP3Q9BZ76 1288 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 KIR3DX1Q9H7L2 352 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 MVB12BQ9H7P6 319 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 POLR1BQ9H9Y6 1135 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 SLC24A2Q9UI40 661 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 ASF1AQ9Y294 204 aa12.05□□□□□ -0.48
SMAD3-205ENST00000558428 A0A1W2PNU3 283 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 A8MU76 341 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 BHMG1C9JSJ3 638 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 GPC4O75487 556 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 HAUS5O94927 633 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 THRAP10827 490 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 ACADLP28330 430 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CAPZBP47756 277 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CARSP49589 748 aaKnown RBP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CBLBQ13191 982 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 EIF3IQ13347 325 aaKnown RBP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 TRA2AQ13595 282 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 PLEKHS1Q5SXH7 462 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 TRMT10BQ6PF06 316 aaKnown RBP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 KLHL35Q6PF15 583 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CNSTQ6PJW8 725 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 ZDHHC24Q6UX98 284 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CAPN12Q6ZSI9 719 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 RAB11FIP2Q7L804 512 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CCDC25Q86WR0 208 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 PLXDC1Q8IUK5 500 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 VRK3Q8IV63 474 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CNTN4Q8IWV2 1026 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 SLC22A15Q8IZD6 547 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 FBXO39Q8N4B4 442 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 C2CD4AQ8NCU7 369 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 RCBTB1Q8NDN9 531 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 ACVR1CQ8NER5 493 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 OR5AR1Q8NGP9 310 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 HGH1Q9BTY7 390 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CCDC86Q9H6F5 360 aaKnown RBP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 AKAP7Q9P0M2 348 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-205ENST00000558428 KLHL3Q9UH77 587 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 CDYLQ9Y232 598 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 LOXL2Q9Y4K0 774 aa12.04□□□□□ -0.48
SMAD3-205ENST00000558428 URB1O60287 2271 aaKnown RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 PMS2P1A4D2B8 440 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 PLD2O14939 933 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 CAPN5O15484 640 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 BRINP1O60477 761 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 SLCO2B1O94956 709 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 LSSP48449 732 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 GFERP55789 205 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 PRKG2Q13237 762 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 FRG1Q14331 258 aaKnown RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 C16orf72Q14CZ0 275 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 GLE1Q53GS7 698 aaKnown RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 TEDDM1Q5T9Z0 273 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 IRGCQ6NXR0 463 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 ZNF549Q6P9A3 640 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 KIAA0408Q6ZU52 694 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 OOSP2Q86WS3 158 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 PALM2Q8IXS6 379 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 TBC1D21Q8IYX1 336 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 ZBTB2Q8N680 514 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 OR52E1Q8NGJ3 308 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 CFAP61Q8NHU2 1237 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 SKA2Q8WVK7 121 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 LCN9Q8WX39 176 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 ZCCHC14Q8WYQ9 949 aaKnown RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 SEC14L1Q92503 715 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 TGM7Q96PF1 710 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 CMKLR1Q99788 373 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 PHACTR1Q9C0D0 580 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 TRIT1Q9H3H1 467 aaKnown RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 FAM114A2Q9NRY5 505 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 ZFATQ9P243 1243 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 SLC17A6Q9P2U8 582 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 DMGDHQ9UI17 866 aaKnown RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 TDRKHQ9Y2W6 561 aaKnown RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 COMMD10Q9Y6G5 202 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 DMXL2Q8TDJ6 3036 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 MN1Q10571 1320 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-205ENST00000558428 CELSR3Q9NYQ7 3312 aa12.03□□□□□ -0.48
SMAD3-205ENST00000558428 ANKRD12Q6UB98 2062 aa12.02□□□□□ -0.48
SMAD3-205ENST00000558428 OR6C74A6NCV1 312 aa12.02□□□□□ -0.49
SMAD3-205ENST00000558428 TMEM8BA6NDV4 472 aa12.02□□□□□ -0.49
SMAD3-205ENST00000558428 HGSO14964 777 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-205ENST00000558428 C9P02748 559 aa12.02□□□□□ -0.49
SMAD3-205ENST00000558428 AHSGP02765 367 aa12.02□□□□□ -0.49
SMAD3-205ENST00000558428 JMJD7P0C870 316 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms