RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 SLC25A45Q8N413 288 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 UBLCP1Q8WVY7 318 aaPredicted RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 LPGAT1Q92604 370 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 FAM136AQ96C01 138 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 ZNF514Q96K75 400 aaPredicted RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 CCM2Q9BSQ5 444 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 GSDMCQ9BYG8 508 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 CCDC68Q9H2F9 335 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 SRA1Q9HD15 236 aaKnown RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 SARS2Q9NP81 518 aaKnown RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 INTS10Q9NVR2 710 aaKnown RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 TRNAU1APQ9NX07 287 aaKnown RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 TXNDC16Q9P2K2 825 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 GNPTGQ9UJJ9 305 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 GPR34Q9UPC5 381 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 PSAT1Q9Y617 370 aa11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 ARHGEF17Q96PE2 2063 aaPredicted RBP11.8□□□□□ -0.52
HMGB1P8-201ENST00000558211 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 FAM159BA6NKW6 160 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 YY2O15391 372 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 YKT6O15498 198 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 AP2A2O94973 939 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 PKMP14618 531 aaKnown RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 CHRM3P20309 590 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 GABRB3P28472 473 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 LEPRP48357 1165 aaKnown RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 PRLHRP49683 370 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 NFE2L1Q14494 772 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 SUZ12Q15022 739 aaKnown RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 SEPT7Q16181 437 aaKnown RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 UAP1Q16222 522 aaPredicted RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 BCL7AQ4VC05 210 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 CTSL3PQ5NE16 218 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 TRMT10CQ7L0Y3 403 aaKnown RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 VN1R5Q7Z5H4 357 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 C11orf96Q7Z7L8 435 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 AMZ2Q86W34 360 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 GKN2Q86XP6 184 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 NRROSQ86YC3 692 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 CNTN4Q8IWV2 1026 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 CFAP206Q8IYR0 622 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 FSTL5Q8N475 847 aaPredicted RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 EID2Q8N6I1 236 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 FAM46DQ8NEK8 389 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 LKAAEAR1Q8TD35 194 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 GPBAR1Q8TDU6 330 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 SAP25Q8TEE9 199 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 SETD7Q8WTS6 366 aaKnown RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 ELMO1Q92556 727 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 NDNQ99608 321 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 TXLNGYQ9BZA5 131 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 P2RY12Q9H244 342 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 DPEP2Q9H4A9 486 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 LIN7BQ9HAP6 207 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 SIRPGQ9P1W8 387 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 ST14Q9Y5Y6 855 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 AK5Q9Y6K8 562 aa11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 RIF1Q5UIP0 2472 aaKnown RBP11.79□□□□□ -0.52
HMGB1P8-201ENST00000558211 ASCC3Q8N3C0 2202 aaKnown RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 A0A087WUV0 522 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 NEMP2A6NFY4 417 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 MGAT4DA6NG13 374 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 E5RI56 91 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 POC1B-GALNT4F8VUJ3 575 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 F8W8V4 182 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 LINC01387J3KSC0 135 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 QSOX1O00391 747 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 RIPK2O43353 540 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 FOXD2O60548 495 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 NIPSNAP2O75323 286 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 FAM155BO75949 473 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 FTH1P02794 183 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 VCLP18206 1134 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 SAT1P21673 171 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 RPS3P23396 243 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 RPL10P27635 214 aaKnown RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 CD151P48509 253 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 ARHGAP8P85298 464 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 BOP1Q14137 746 aaKnown RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 SLC29A2Q14542 456 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 RBM20Q5T481 1227 aaKnown RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 STPG1Q5TH74 334 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 ZNF549Q6P9A3 640 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 FAM83HQ6ZRV2 1179 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 KIAA0408Q6ZU52 694 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 CYS1Q717R9 158 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 LRRC6Q86X45 466 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 LILRA3Q8N6C8 439 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 GPATCH11Q8N954 259 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 AENQ8WTP8 325 aaKnown RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 FAM122AQ96E09 287 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 BIRC8Q96P09 236 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 CYTH2Q99418 400 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 TIMM29Q9BSF4 260 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 TSSK1BQ9BXA7 367 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 PRDM8Q9NQV8 689 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 SPATS2LQ9NUQ6 558 aaKnown RBP11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 NSMCE4AQ9NXX6 385 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 TAAR2Q9P1P5 351 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms