RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 METTL18O95568 372 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 AP2A1O95782 977 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 KLK3P07288 261 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-235ENST00000557740 GSTM1P09488 218 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 PREPP48147 710 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 CD151P48509 253 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 GSDMDP57764 484 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 RPS18P62269 152 aaKnown RBP14.22□□□□□ -0.13
SHMT2-235ENST00000557740 GSTM4Q03013 218 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 RPA4Q13156 261 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 DBN1Q16643 649 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 UGT8Q16880 541 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 ASB18Q6ZVZ8 466 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 SYVN1Q86TM6 617 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 OR52E1Q8NGJ3 308 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 STYXQ8WUJ0 223 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 CPT1BQ92523 772 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 RUFY1Q96T51 708 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 TMEM121Q9BTD3 319 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 PIH1D1Q9NWS0 290 aaKnown RBP14.22□□□□□ -0.13
SHMT2-235ENST00000557740 SMARCAL1Q9NZC9 954 aa14.22□□□□□ -0.13
SHMT2-235ENST00000557740 R3HDM2Q9Y2K5 976 aaKnown RBP14.22□□□□□ -0.13
SHMT2-235ENST00000557740 CCDC78A2IDD5 438 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 C2orf74A8MZ97 194 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 TMEM150CB9EJG8 249 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 QSOX1O00391 747 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 BTN3A1O00481 513 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 DDX3YO15523 660 aaKnown RBP14.21□□□□□ -0.13
SHMT2-235ENST00000557740 AP2A2O94973 939 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 GAS8O95995 478 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 PRSS56P0CW18 603 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 NR1D1P20393 614 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 CYP2A7P20853 494 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 PDHA2P29803 388 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 GDF10P55107 478 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 FOXK1P85037 733 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 GPS2Q13227 327 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 KLF1Q13351 362 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-235ENST00000557740 ZNF658BQ4V348 819 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-235ENST00000557740 COLEC12Q5KU26 742 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 MICALCLQ6ZW33 695 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 LINC00523Q86TU6 105 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 HOOK3Q86VS8 718 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 AMIGO1Q86WK6 493 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 PIANPQ8IYJ0 282 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 CLDN19Q8N6F1 224 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 TEX19Q8NA77 164 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 SLC35B2Q8TB61 432 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 THAP4Q8WY91 577 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHMT2-235ENST00000557740 CLIP3Q96DZ5 547 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 DESI2Q9BSY9 194 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 TFB2MQ9H5Q4 396 aaKnown RBP14.21□□□□□ -0.13
SHMT2-235ENST00000557740 AKIRIN1Q9H9L7 192 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-235ENST00000557740 SYTL2Q9HCH5 934 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 TLK1Q9UKI8 766 aa14.21□□□□□ -0.13
SHMT2-235ENST00000557740 BSNQ9UPA5 3926 aa14.21□□□□□ -0.14
SHMT2-235ENST00000557740 BTN3A3O00478 584 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 LIN7AO14910 233 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-235ENST00000557740 DNAJB5O75953 348 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 FTH1P02794 183 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 MSNP26038 577 aaKnown RBP14.2□□□□□ -0.14
SHMT2-235ENST00000557740 PRDX3P30048 256 aaKnown RBP14.2□□□□□ -0.14
SHMT2-235ENST00000557740 NSG1P42857 185 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 LMAN1P49257 510 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 ABRQ12979 859 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 PRKG2Q13237 762 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 SEMA5AQ13591 1074 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 BOP1Q14137 746 aaKnown RBP14.2□□□□□ -0.14
SHMT2-235ENST00000557740 IGFBP7Q16270 282 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 SYTL3Q4VX76 610 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 SEL1L2Q5TEA6 688 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 APLFQ8IW19 511 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-235ENST00000557740 DNAAF3Q8N9W5 541 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 PHC3Q8NDX5 983 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 ATG4AQ8WYN0 398 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 TFGQ92734 400 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-235ENST00000557740 CDKN2AIPNLQ96HQ2 116 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 LRFN5Q96NI6 719 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 PITPNM3Q9BZ71 974 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 SLC7A5P2Q9GIP4 190 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 CHST8Q9H2A9 424 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 XKR8Q9H6D3 395 aa14.2□□□□□ -0.14
SHMT2-235ENST00000557740 ACTR5Q9H9F9 607 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-235ENST00000557740 FARSAQ9Y285 508 aaKnown RBP14.2□□□□□ -0.14
SHMT2-235ENST00000557740 LRRK2Q5S007 2527 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 MAST4O15021 2626 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 TCRBV7S2A1N4TA0A589 114 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 ERI2A8K979 691 aaKnown RBP14.19□□□□□ -0.14
SHMT2-235ENST00000557740 K7EM74 188 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 MEN1O00255 615 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 ST6GAL1P15907 406 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 CDH17Q12864 832 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 IL10RAQ13651 578 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 ITIH4Q14624 930 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 CCDC38Q502W7 563 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 PRAMEF17Q5VTA0 474 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 IZUMO3Q5VZ72 239 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 PACS1Q6VY07 963 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 PPP1R21Q6ZMI0 780 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms