RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 HEXDCQ8WVB3 486 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 TRAPPC9Q96Q05 1148 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 COPS8Q99627 209 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 OR52A5Q9H2C5 316 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 ACTR5Q9H9F9 607 aaPredicted RBP15.48■□□□□ 0.07
SCFD1-224ENST00000557713 ARNT2Q9HBZ2 717 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 TFR2Q9UP52 801 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
SCFD1-224ENST00000557713 IGLV3-16A0A075B6K0 115 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 GSAPA4D1B5 854 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 TMEM150CB9EJG8 249 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 BTN3A1O00481 513 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 AGFG2O95081 481 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 PSMB4P28070 264 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 CD151P48509 253 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 VAV2P52735 878 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 ZNF140P52738 457 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-224ENST00000557713 COPS2P61201 443 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 TMPRSS15P98073 1019 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 OTUD4Q01804 1114 aaKnown RBP15.47■□□□□ 0.07
SCFD1-224ENST00000557713 INPP5JQ15735 1006 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-224ENST00000557713 C11orf63Q6NUN7 778 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 JMJD6Q6NYC1 403 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-224ENST00000557713 MED25Q71SY5 747 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 HPS6Q86YV9 775 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 SYTL1Q8IYJ3 562 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 Q8NA96 180 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 GLIS1Q8NBF1 620 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 ACTL9Q8TC94 416 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 NUDT9Q9BW91 350 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 COG4Q9H9E3 785 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 ZDHHC3Q9NYG2 299 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 PLEKHB1Q9UF11 243 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-224ENST00000557713 SERTAD3Q9UJW9 196 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 EFR3BQ9Y2G0 817 aa15.47■□□□□ 0.07
SCFD1-224ENST00000557713 TEX15Q9BXT5 2789 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 TRBV5-4A0A0C4DH59 114 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 CFAP99D6REC4 459 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 ZNF185O15231 689 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 LDB2O43679 373 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 DPM1O60762 260 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 SEMA7AO75326 666 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 ITGALP20701 1170 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 CYP2A7P20853 494 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 PDHA2P29803 388 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 HADHAP40939 763 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 LMAN1P49257 510 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 CDKN1CP49918 316 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-224ENST00000557713 PRPSAP1Q14558 356 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 GPR33Q49SQ1 333 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 ZNF385CQ66K41 422 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-224ENST00000557713 HIST2H2BCQ6DN03 193 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 KLHDC8BQ8IXV7 354 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 ADGRF3Q8IZF5 1079 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 TMEM102Q8N9M5 508 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-224ENST00000557713 OR52E1Q8NGJ3 308 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 DPH2Q9BQC3 489 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-224ENST00000557713 MVB12BQ9H7P6 319 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 PCDHA3Q9Y5H8 950 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 PCDHA13Q9Y5I0 950 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 MED13Q9UHV7 2174 aa15.46■□□□□ 0.07
SCFD1-224ENST00000557713 PCSK5Q92824 1860 aa15.46■□□□□ 0.06
SCFD1-224ENST00000557713 IFRD1O00458 451 aaPredicted RBP15.45■□□□□ 0.06
SCFD1-224ENST00000557713 CCL22O00626 93 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 ZNF749O43361 778 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 RBP3P10745 1247 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 PVRP15151 417 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 MC4RP32245 332 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 EIF3EP60228 445 aaKnown RBP15.45■□□□□ 0.06
SCFD1-224ENST00000557713 RPA4Q13156 261 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 BOP1Q14137 746 aaKnown RBP15.45■□□□□ 0.06
SCFD1-224ENST00000557713 SPARCL1Q14515 664 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 NCF4Q15080 339 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 PTCHD3Q3KNS1 767 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 PRR30Q53SZ7 412 aaPredicted RBP15.45■□□□□ 0.06
SCFD1-224ENST00000557713 CCDC181Q5TID7 509 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 SARM1Q6SZW1 724 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 CDHR3Q6ZTQ4 885 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 MICALCLQ6ZW33 695 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 AMIGO1Q86WK6 493 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 CDKL3Q8IVW4 592 aaPredicted RBP15.45■□□□□ 0.06
SCFD1-224ENST00000557713 RBMXL3Q8N7X1 1067 aaKnown RBP15.45■□□□□ 0.06
SCFD1-224ENST00000557713 TC2NQ8N9U0 490 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 SSC4DQ8WTU2 575 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 SMAD5Q99717 465 aaKnown RBP15.45■□□□□ 0.06
SCFD1-224ENST00000557713 TBL1YQ9BQ87 522 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 FERMT1Q9BQL6 677 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 MFRPQ9BY79 579 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 KLHL25Q9H0H3 589 aa15.45■□□□□ 0.06
SCFD1-224ENST00000557713 FEZ2Q9UHY8 353 aaPredicted RBP15.45■□□□□ 0.06
SCFD1-224ENST00000557713 A6NL46 340 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 C2orf74A8MZ97 194 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 TCP11X1B4DZS4 312 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 E7EQ34 232 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 H3BMH7 237 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 H7C0S8 307 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 KCNN4O15554 427 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 MAP3K7O43318 606 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 KLF7O75840 302 aaPredicted RBP15.44■□□□□ 0.06
SCFD1-224ENST00000557713 HBQ1P09105 142 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms